Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17384 | 52375;52376;52377 | chr2:178608861;178608860;178608859 | chr2:179473588;179473587;179473586 |
N2AB | 15743 | 47452;47453;47454 | chr2:178608861;178608860;178608859 | chr2:179473588;179473587;179473586 |
N2A | 14816 | 44671;44672;44673 | chr2:178608861;178608860;178608859 | chr2:179473588;179473587;179473586 |
N2B | 8319 | 25180;25181;25182 | chr2:178608861;178608860;178608859 | chr2:179473588;179473587;179473586 |
Novex-1 | 8444 | 25555;25556;25557 | chr2:178608861;178608860;178608859 | chr2:179473588;179473587;179473586 |
Novex-2 | 8511 | 25756;25757;25758 | chr2:178608861;178608860;178608859 | chr2:179473588;179473587;179473586 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1307047586 | -0.448 | None | N | 0.043 | 0.136 | 0.146414634003 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/N | rs1307047586 | -0.448 | None | N | 0.043 | 0.136 | 0.146414634003 | gnomAD-4.0.0 | 4.11044E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39928E-06 | 0 | 0 |
T/S | None | None | 0.005 | N | 0.171 | 0.062 | 0.104622674875 | gnomAD-4.0.0 | 6.85074E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99879E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1063 | likely_benign | 0.089 | benign | -0.841 | Destabilizing | 0.01 | N | 0.204 | neutral | D | 0.522988905 | None | None | N |
T/C | 0.4248 | ambiguous | 0.3842 | ambiguous | -0.557 | Destabilizing | 0.628 | D | 0.343 | neutral | None | None | None | None | N |
T/D | 0.2211 | likely_benign | 0.1984 | benign | -0.214 | Destabilizing | None | N | 0.067 | neutral | None | None | None | None | N |
T/E | 0.311 | likely_benign | 0.2955 | benign | -0.239 | Destabilizing | 0.007 | N | 0.217 | neutral | None | None | None | None | N |
T/F | 0.2745 | likely_benign | 0.231 | benign | -1.051 | Destabilizing | 0.628 | D | 0.421 | neutral | None | None | None | None | N |
T/G | 0.2237 | likely_benign | 0.1663 | benign | -1.052 | Destabilizing | 0.007 | N | 0.214 | neutral | None | None | None | None | N |
T/H | 0.2332 | likely_benign | 0.1895 | benign | -1.359 | Destabilizing | 0.214 | N | 0.421 | neutral | None | None | None | None | N |
T/I | 0.3026 | likely_benign | 0.2534 | benign | -0.379 | Destabilizing | 0.106 | N | 0.367 | neutral | N | 0.497584704 | None | None | N |
T/K | 0.3699 | ambiguous | 0.3323 | benign | -0.641 | Destabilizing | 0.016 | N | 0.343 | neutral | None | None | None | None | N |
T/L | 0.1607 | likely_benign | 0.1354 | benign | -0.379 | Destabilizing | 0.031 | N | 0.3 | neutral | None | None | None | None | N |
T/M | 0.1173 | likely_benign | 0.1023 | benign | -0.001 | Destabilizing | 0.628 | D | 0.337 | neutral | None | None | None | None | N |
T/N | 0.0569 | likely_benign | 0.0462 | benign | -0.519 | Destabilizing | None | N | 0.043 | neutral | N | 0.456281124 | None | None | N |
T/P | 0.5167 | ambiguous | 0.3748 | ambiguous | -0.503 | Destabilizing | 0.106 | N | 0.337 | neutral | N | 0.498091683 | None | None | N |
T/Q | 0.2672 | likely_benign | 0.2326 | benign | -0.8 | Destabilizing | 0.072 | N | 0.307 | neutral | None | None | None | None | N |
T/R | 0.35 | ambiguous | 0.3108 | benign | -0.359 | Destabilizing | 0.031 | N | 0.309 | neutral | None | None | None | None | N |
T/S | 0.0905 | likely_benign | 0.0771 | benign | -0.827 | Destabilizing | 0.005 | N | 0.171 | neutral | N | 0.474789527 | None | None | N |
T/V | 0.2263 | likely_benign | 0.1986 | benign | -0.503 | Destabilizing | 0.061 | N | 0.149 | neutral | None | None | None | None | N |
T/W | 0.6045 | likely_pathogenic | 0.5507 | ambiguous | -0.929 | Destabilizing | 0.864 | D | 0.365 | neutral | None | None | None | None | N |
T/Y | 0.2149 | likely_benign | 0.1836 | benign | -0.698 | Destabilizing | 0.628 | D | 0.423 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.