Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17386 | 52381;52382;52383 | chr2:178608855;178608854;178608853 | chr2:179473582;179473581;179473580 |
N2AB | 15745 | 47458;47459;47460 | chr2:178608855;178608854;178608853 | chr2:179473582;179473581;179473580 |
N2A | 14818 | 44677;44678;44679 | chr2:178608855;178608854;178608853 | chr2:179473582;179473581;179473580 |
N2B | 8321 | 25186;25187;25188 | chr2:178608855;178608854;178608853 | chr2:179473582;179473581;179473580 |
Novex-1 | 8446 | 25561;25562;25563 | chr2:178608855;178608854;178608853 | chr2:179473582;179473581;179473580 |
Novex-2 | 8513 | 25762;25763;25764 | chr2:178608855;178608854;178608853 | chr2:179473582;179473581;179473580 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1250473011 | None | 0.37 | N | 0.207 | 0.093 | 0.347217280506 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1250473011 | None | 0.37 | N | 0.207 | 0.093 | 0.347217280506 | gnomAD-4.0.0 | 6.57921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4718E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4729 | ambiguous | 0.4085 | ambiguous | -1.964 | Destabilizing | 0.978 | D | 0.579 | neutral | N | 0.471229146 | None | None | N |
V/C | 0.8 | likely_pathogenic | 0.7953 | pathogenic | -1.789 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/D | 0.9958 | likely_pathogenic | 0.9925 | pathogenic | -2.441 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | N | 0.52099165 | None | None | N |
V/E | 0.9903 | likely_pathogenic | 0.9846 | pathogenic | -2.14 | Highly Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
V/F | 0.6666 | likely_pathogenic | 0.5967 | pathogenic | -1.166 | Destabilizing | 0.997 | D | 0.84 | deleterious | N | 0.478742753 | None | None | N |
V/G | 0.7941 | likely_pathogenic | 0.735 | pathogenic | -2.587 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | N | 0.520738161 | None | None | N |
V/H | 0.9945 | likely_pathogenic | 0.9909 | pathogenic | -2.547 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/I | 0.1008 | likely_benign | 0.0949 | benign | -0.185 | Destabilizing | 0.37 | N | 0.207 | neutral | N | 0.448405428 | None | None | N |
V/K | 0.9926 | likely_pathogenic | 0.9879 | pathogenic | -1.453 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
V/L | 0.3854 | ambiguous | 0.346 | ambiguous | -0.185 | Destabilizing | 0.9 | D | 0.473 | neutral | N | 0.491620274 | None | None | N |
V/M | 0.3832 | ambiguous | 0.3155 | benign | -0.552 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
V/N | 0.9822 | likely_pathogenic | 0.9705 | pathogenic | -2.007 | Highly Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
V/P | 0.9934 | likely_pathogenic | 0.9896 | pathogenic | -0.754 | Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
V/Q | 0.9814 | likely_pathogenic | 0.9709 | pathogenic | -1.66 | Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
V/R | 0.9834 | likely_pathogenic | 0.9742 | pathogenic | -1.649 | Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
V/S | 0.8617 | likely_pathogenic | 0.8027 | pathogenic | -2.682 | Highly Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
V/T | 0.7326 | likely_pathogenic | 0.6599 | pathogenic | -2.199 | Highly Destabilizing | 0.992 | D | 0.663 | neutral | None | None | None | None | N |
V/W | 0.9955 | likely_pathogenic | 0.993 | pathogenic | -1.67 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/Y | 0.9703 | likely_pathogenic | 0.9591 | pathogenic | -1.273 | Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.