Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17387 | 52384;52385;52386 | chr2:178608852;178608851;178608850 | chr2:179473579;179473578;179473577 |
N2AB | 15746 | 47461;47462;47463 | chr2:178608852;178608851;178608850 | chr2:179473579;179473578;179473577 |
N2A | 14819 | 44680;44681;44682 | chr2:178608852;178608851;178608850 | chr2:179473579;179473578;179473577 |
N2B | 8322 | 25189;25190;25191 | chr2:178608852;178608851;178608850 | chr2:179473579;179473578;179473577 |
Novex-1 | 8447 | 25564;25565;25566 | chr2:178608852;178608851;178608850 | chr2:179473579;179473578;179473577 |
Novex-2 | 8514 | 25765;25766;25767 | chr2:178608852;178608851;178608850 | chr2:179473579;179473578;179473577 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | rs2154197942 | None | 0.915 | N | 0.601 | 0.355 | 0.736726114388 | gnomAD-4.0.0 | 1.36983E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79973E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2062 | likely_benign | 0.1772 | benign | -2.106 | Highly Destabilizing | 0.035 | N | 0.42 | neutral | None | None | None | None | N |
L/C | 0.3618 | ambiguous | 0.3252 | benign | -1.446 | Destabilizing | 0.824 | D | 0.533 | neutral | None | None | None | None | N |
L/D | 0.6311 | likely_pathogenic | 0.5954 | pathogenic | -1.785 | Destabilizing | 0.38 | N | 0.609 | neutral | None | None | None | None | N |
L/E | 0.3739 | ambiguous | 0.3582 | ambiguous | -1.73 | Destabilizing | 0.38 | N | 0.602 | neutral | None | None | None | None | N |
L/F | 0.1327 | likely_benign | 0.1171 | benign | -1.423 | Destabilizing | 0.317 | N | 0.476 | neutral | N | 0.502781418 | None | None | N |
L/G | 0.5087 | ambiguous | 0.4444 | ambiguous | -2.484 | Highly Destabilizing | 0.149 | N | 0.581 | neutral | None | None | None | None | N |
L/H | 0.1945 | likely_benign | 0.1713 | benign | -1.652 | Destabilizing | 0.915 | D | 0.601 | neutral | N | 0.492564424 | None | None | N |
L/I | 0.0654 | likely_benign | 0.0587 | benign | -1.102 | Destabilizing | None | N | 0.197 | neutral | N | 0.44902429 | None | None | N |
L/K | 0.2915 | likely_benign | 0.2791 | benign | -1.502 | Destabilizing | 0.38 | N | 0.605 | neutral | None | None | None | None | N |
L/M | 0.1027 | likely_benign | 0.089 | benign | -0.936 | Destabilizing | 0.38 | N | 0.525 | neutral | None | None | None | None | N |
L/N | 0.2537 | likely_benign | 0.223 | benign | -1.43 | Destabilizing | 0.38 | N | 0.607 | neutral | None | None | None | None | N |
L/P | 0.8954 | likely_pathogenic | 0.8831 | pathogenic | -1.409 | Destabilizing | 0.484 | N | 0.607 | neutral | N | 0.466786882 | None | None | N |
L/Q | 0.1507 | likely_benign | 0.1367 | benign | -1.578 | Destabilizing | 0.555 | D | 0.599 | neutral | None | None | None | None | N |
L/R | 0.2268 | likely_benign | 0.2082 | benign | -0.913 | Destabilizing | 0.317 | N | 0.603 | neutral | N | 0.469687564 | None | None | N |
L/S | 0.2042 | likely_benign | 0.1693 | benign | -2.104 | Highly Destabilizing | 0.081 | N | 0.519 | neutral | None | None | None | None | N |
L/T | 0.1111 | likely_benign | 0.1016 | benign | -1.932 | Destabilizing | 0.001 | N | 0.293 | neutral | None | None | None | None | N |
L/V | 0.0719 | likely_benign | 0.0637 | benign | -1.409 | Destabilizing | None | N | 0.238 | neutral | N | 0.404809366 | None | None | N |
L/W | 0.3126 | likely_benign | 0.2577 | benign | -1.534 | Destabilizing | 0.935 | D | 0.597 | neutral | None | None | None | None | N |
L/Y | 0.301 | likely_benign | 0.26 | benign | -1.315 | Destabilizing | 0.555 | D | 0.563 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.