Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17388 | 52387;52388;52389 | chr2:178608849;178608848;178608847 | chr2:179473576;179473575;179473574 |
N2AB | 15747 | 47464;47465;47466 | chr2:178608849;178608848;178608847 | chr2:179473576;179473575;179473574 |
N2A | 14820 | 44683;44684;44685 | chr2:178608849;178608848;178608847 | chr2:179473576;179473575;179473574 |
N2B | 8323 | 25192;25193;25194 | chr2:178608849;178608848;178608847 | chr2:179473576;179473575;179473574 |
Novex-1 | 8448 | 25567;25568;25569 | chr2:178608849;178608848;178608847 | chr2:179473576;179473575;179473574 |
Novex-2 | 8515 | 25768;25769;25770 | chr2:178608849;178608848;178608847 | chr2:179473576;179473575;179473574 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | 1.0 | N | 0.791 | 0.517 | 0.628884166652 | gnomAD-4.0.0 | 1.59485E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.90505E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.8488 | likely_pathogenic | 0.8252 | pathogenic | 0.044 | Stabilizing | 0.998 | D | 0.646 | neutral | None | None | None | None | N |
C/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
C/E | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -0.76 | Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
C/F | 0.8046 | likely_pathogenic | 0.7915 | pathogenic | 0.247 | Stabilizing | 1.0 | D | 0.921 | deleterious | N | 0.4710875 | None | None | N |
C/G | 0.8197 | likely_pathogenic | 0.7699 | pathogenic | -0.264 | Destabilizing | 1.0 | D | 0.893 | deleterious | N | 0.501583765 | None | None | N |
C/H | 0.9983 | likely_pathogenic | 0.9978 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
C/I | 0.7132 | likely_pathogenic | 0.6901 | pathogenic | 0.873 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
C/K | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | 0.574 | Stabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
C/L | 0.5407 | ambiguous | 0.5165 | ambiguous | 0.873 | Stabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
C/M | 0.8689 | likely_pathogenic | 0.8595 | pathogenic | 0.105 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
C/N | 0.9978 | likely_pathogenic | 0.9973 | pathogenic | -0.449 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
C/P | 0.9977 | likely_pathogenic | 0.9967 | pathogenic | 0.617 | Stabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
C/Q | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.944 | deleterious | None | None | None | None | N |
C/R | 0.9983 | likely_pathogenic | 0.9975 | pathogenic | -0.457 | Destabilizing | 1.0 | D | 0.935 | deleterious | N | 0.501583765 | None | None | N |
C/S | 0.9641 | likely_pathogenic | 0.9528 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.501583765 | None | None | N |
C/T | 0.962 | likely_pathogenic | 0.9524 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
C/V | 0.5858 | likely_pathogenic | 0.5637 | ambiguous | 0.617 | Stabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
C/W | 0.9916 | likely_pathogenic | 0.9893 | pathogenic | -0.255 | Destabilizing | 1.0 | D | 0.906 | deleterious | N | 0.501583765 | None | None | N |
C/Y | 0.9751 | likely_pathogenic | 0.9704 | pathogenic | 0.11 | Stabilizing | 1.0 | D | 0.938 | deleterious | N | 0.501583765 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.