Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17389 | 52390;52391;52392 | chr2:178608846;178608845;178608844 | chr2:179473573;179473572;179473571 |
N2AB | 15748 | 47467;47468;47469 | chr2:178608846;178608845;178608844 | chr2:179473573;179473572;179473571 |
N2A | 14821 | 44686;44687;44688 | chr2:178608846;178608845;178608844 | chr2:179473573;179473572;179473571 |
N2B | 8324 | 25195;25196;25197 | chr2:178608846;178608845;178608844 | chr2:179473573;179473572;179473571 |
Novex-1 | 8449 | 25570;25571;25572 | chr2:178608846;178608845;178608844 | chr2:179473573;179473572;179473571 |
Novex-2 | 8516 | 25771;25772;25773 | chr2:178608846;178608845;178608844 | chr2:179473573;179473572;179473571 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs779439447 | -1.29 | 0.996 | N | 0.47 | 0.36 | 0.272205846399 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/E | rs779439447 | -1.29 | 0.996 | N | 0.47 | 0.36 | 0.272205846399 | gnomAD-4.0.0 | 1.5947E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43316E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4297 | ambiguous | 0.44 | ambiguous | -0.972 | Destabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | I |
K/C | 0.557 | ambiguous | 0.5333 | ambiguous | -1.027 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
K/D | 0.8141 | likely_pathogenic | 0.8188 | pathogenic | -1.44 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
K/E | 0.3187 | likely_benign | 0.3443 | ambiguous | -1.188 | Destabilizing | 0.996 | D | 0.47 | neutral | N | 0.43892194 | None | None | I |
K/F | 0.7711 | likely_pathogenic | 0.7591 | pathogenic | -0.14 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
K/G | 0.6436 | likely_pathogenic | 0.6233 | pathogenic | -1.439 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
K/H | 0.2638 | likely_benign | 0.2615 | benign | -1.617 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
K/I | 0.3254 | likely_benign | 0.3467 | ambiguous | 0.329 | Stabilizing | 1.0 | D | 0.826 | deleterious | N | 0.501511981 | None | None | I |
K/L | 0.36 | ambiguous | 0.3662 | ambiguous | 0.329 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
K/M | 0.2392 | likely_benign | 0.2562 | benign | -0.025 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
K/N | 0.5386 | ambiguous | 0.5548 | ambiguous | -1.606 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | N | 0.44284768 | None | None | I |
K/P | 0.9828 | likely_pathogenic | 0.9775 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
K/Q | 0.1455 | likely_benign | 0.1437 | benign | -1.284 | Destabilizing | 0.999 | D | 0.659 | neutral | N | 0.448157499 | None | None | I |
K/R | 0.08 | likely_benign | 0.0763 | benign | -1.213 | Destabilizing | 0.884 | D | 0.391 | neutral | N | 0.431822609 | None | None | I |
K/S | 0.428 | ambiguous | 0.4409 | ambiguous | -2.026 | Highly Destabilizing | 0.998 | D | 0.569 | neutral | None | None | None | None | I |
K/T | 0.163 | likely_benign | 0.1765 | benign | -1.544 | Destabilizing | 0.999 | D | 0.758 | deleterious | N | 0.382279223 | None | None | I |
K/V | 0.2987 | likely_benign | 0.3147 | benign | -0.081 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
K/W | 0.7634 | likely_pathogenic | 0.7318 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
K/Y | 0.6266 | likely_pathogenic | 0.6142 | pathogenic | 0.055 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.