Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17392 | 52399;52400;52401 | chr2:178608837;178608836;178608835 | chr2:179473564;179473563;179473562 |
N2AB | 15751 | 47476;47477;47478 | chr2:178608837;178608836;178608835 | chr2:179473564;179473563;179473562 |
N2A | 14824 | 44695;44696;44697 | chr2:178608837;178608836;178608835 | chr2:179473564;179473563;179473562 |
N2B | 8327 | 25204;25205;25206 | chr2:178608837;178608836;178608835 | chr2:179473564;179473563;179473562 |
Novex-1 | 8452 | 25579;25580;25581 | chr2:178608837;178608836;178608835 | chr2:179473564;179473563;179473562 |
Novex-2 | 8519 | 25780;25781;25782 | chr2:178608837;178608836;178608835 | chr2:179473564;179473563;179473562 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 1.0 | N | 0.873 | 0.603 | 0.445107144611 | gnomAD-4.0.0 | 1.36961E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31922E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1129 | likely_benign | 0.111 | benign | -1.849 | Destabilizing | 1.0 | D | 0.82 | deleterious | N | 0.507189947 | None | None | I |
P/C | 0.7408 | likely_pathogenic | 0.7388 | pathogenic | -1.172 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
P/D | 0.8242 | likely_pathogenic | 0.8391 | pathogenic | -2.289 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
P/E | 0.5131 | ambiguous | 0.5344 | ambiguous | -2.164 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
P/F | 0.7885 | likely_pathogenic | 0.8019 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
P/G | 0.6493 | likely_pathogenic | 0.6608 | pathogenic | -2.248 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
P/H | 0.5156 | ambiguous | 0.5309 | ambiguous | -1.731 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
P/I | 0.4997 | ambiguous | 0.4908 | ambiguous | -0.782 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
P/K | 0.4858 | ambiguous | 0.5144 | ambiguous | -1.663 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
P/L | 0.2533 | likely_benign | 0.2433 | benign | -0.782 | Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.518144495 | None | None | I |
P/M | 0.4374 | ambiguous | 0.4421 | ambiguous | -0.64 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/N | 0.7196 | likely_pathogenic | 0.7274 | pathogenic | -1.725 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | I |
P/Q | 0.3396 | likely_benign | 0.3488 | ambiguous | -1.756 | Destabilizing | 1.0 | D | 0.89 | deleterious | N | 0.491077018 | None | None | I |
P/R | 0.4142 | ambiguous | 0.4461 | ambiguous | -1.234 | Destabilizing | 1.0 | D | 0.887 | deleterious | N | 0.487772108 | None | None | I |
P/S | 0.3387 | likely_benign | 0.3353 | benign | -2.211 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | N | 0.493772816 | None | None | I |
P/T | 0.3103 | likely_benign | 0.3083 | benign | -1.967 | Destabilizing | 1.0 | D | 0.873 | deleterious | N | 0.49978675 | None | None | I |
P/V | 0.3566 | ambiguous | 0.3506 | ambiguous | -1.11 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
P/W | 0.9227 | likely_pathogenic | 0.9304 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
P/Y | 0.7572 | likely_pathogenic | 0.7754 | pathogenic | -1.263 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.