Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17397 | 52414;52415;52416 | chr2:178608822;178608821;178608820 | chr2:179473549;179473548;179473547 |
N2AB | 15756 | 47491;47492;47493 | chr2:178608822;178608821;178608820 | chr2:179473549;179473548;179473547 |
N2A | 14829 | 44710;44711;44712 | chr2:178608822;178608821;178608820 | chr2:179473549;179473548;179473547 |
N2B | 8332 | 25219;25220;25221 | chr2:178608822;178608821;178608820 | chr2:179473549;179473548;179473547 |
Novex-1 | 8457 | 25594;25595;25596 | chr2:178608822;178608821;178608820 | chr2:179473549;179473548;179473547 |
Novex-2 | 8524 | 25795;25796;25797 | chr2:178608822;178608821;178608820 | chr2:179473549;179473548;179473547 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs2055561994 | None | 1.0 | D | 0.843 | 0.63 | 0.425851741357 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/D | rs2055561994 | None | 1.0 | D | 0.843 | 0.63 | 0.425851741357 | gnomAD-4.0.0 | 6.58111E-06 | None | None | None | None | I | None | 2.41488E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.9767 | likely_pathogenic | 0.9822 | pathogenic | -0.227 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.516985044 | None | None | I |
G/C | 0.9935 | likely_pathogenic | 0.9953 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.8 | deleterious | D | 0.544750537 | None | None | I |
G/D | 0.9985 | likely_pathogenic | 0.9988 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.541962152 | None | None | I |
G/E | 0.9989 | likely_pathogenic | 0.9992 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
G/F | 0.999 | likely_pathogenic | 0.9994 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
G/H | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
G/I | 0.9992 | likely_pathogenic | 0.9995 | pathogenic | -0.352 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
G/K | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | -0.584 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
G/L | 0.9988 | likely_pathogenic | 0.9992 | pathogenic | -0.352 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
G/M | 0.9993 | likely_pathogenic | 0.9996 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
G/N | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
G/P | 0.9997 | likely_pathogenic | 0.9999 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/Q | 0.9987 | likely_pathogenic | 0.999 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
G/R | 0.9956 | likely_pathogenic | 0.9964 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.845 | deleterious | N | 0.498627299 | None | None | I |
G/S | 0.9798 | likely_pathogenic | 0.9828 | pathogenic | -0.405 | Destabilizing | 1.0 | D | 0.806 | deleterious | N | 0.506007132 | None | None | I |
G/T | 0.9969 | likely_pathogenic | 0.998 | pathogenic | -0.493 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
G/V | 0.9983 | likely_pathogenic | 0.999 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.526139303 | None | None | I |
G/W | 0.998 | likely_pathogenic | 0.9987 | pathogenic | -1.176 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
G/Y | 0.9989 | likely_pathogenic | 0.9992 | pathogenic | -0.798 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.