Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17399 | 52420;52421;52422 | chr2:178608816;178608815;178608814 | chr2:179473543;179473542;179473541 |
N2AB | 15758 | 47497;47498;47499 | chr2:178608816;178608815;178608814 | chr2:179473543;179473542;179473541 |
N2A | 14831 | 44716;44717;44718 | chr2:178608816;178608815;178608814 | chr2:179473543;179473542;179473541 |
N2B | 8334 | 25225;25226;25227 | chr2:178608816;178608815;178608814 | chr2:179473543;179473542;179473541 |
Novex-1 | 8459 | 25600;25601;25602 | chr2:178608816;178608815;178608814 | chr2:179473543;179473542;179473541 |
Novex-2 | 8526 | 25801;25802;25803 | chr2:178608816;178608815;178608814 | chr2:179473543;179473542;179473541 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1364503531 | -0.708 | 0.999 | N | 0.707 | 0.313 | 0.248417906384 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
S/N | rs1364503531 | -0.708 | 0.999 | N | 0.707 | 0.313 | 0.248417906384 | gnomAD-4.0.0 | 3.18816E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72384E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.156 | likely_benign | 0.1423 | benign | -0.883 | Destabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | I |
S/C | 0.1303 | likely_benign | 0.1245 | benign | -0.587 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.476981553 | None | None | I |
S/D | 0.9367 | likely_pathogenic | 0.9418 | pathogenic | -0.326 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | I |
S/E | 0.9445 | likely_pathogenic | 0.9518 | pathogenic | -0.317 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
S/F | 0.7585 | likely_pathogenic | 0.7328 | pathogenic | -1.046 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
S/G | 0.2605 | likely_benign | 0.2601 | benign | -1.139 | Destabilizing | 0.999 | D | 0.595 | neutral | N | 0.463247574 | None | None | I |
S/H | 0.8566 | likely_pathogenic | 0.8573 | pathogenic | -1.569 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
S/I | 0.707 | likely_pathogenic | 0.7046 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.828 | deleterious | N | 0.503528824 | None | None | I |
S/K | 0.9829 | likely_pathogenic | 0.9856 | pathogenic | -0.703 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
S/L | 0.4213 | ambiguous | 0.3929 | ambiguous | -0.301 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
S/M | 0.4805 | ambiguous | 0.4718 | ambiguous | 0.023 | Stabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
S/N | 0.6305 | likely_pathogenic | 0.6083 | pathogenic | -0.694 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.493324608 | None | None | I |
S/P | 0.9913 | likely_pathogenic | 0.9911 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
S/Q | 0.8995 | likely_pathogenic | 0.9054 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
S/R | 0.969 | likely_pathogenic | 0.9719 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.494094622 | None | None | I |
S/T | 0.2501 | likely_benign | 0.2407 | benign | -0.724 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.479246051 | None | None | I |
S/V | 0.5758 | likely_pathogenic | 0.5702 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
S/W | 0.8528 | likely_pathogenic | 0.8542 | pathogenic | -0.988 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
S/Y | 0.7346 | likely_pathogenic | 0.7282 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.