Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17400 | 52423;52424;52425 | chr2:178608813;178608812;178608811 | chr2:179473540;179473539;179473538 |
N2AB | 15759 | 47500;47501;47502 | chr2:178608813;178608812;178608811 | chr2:179473540;179473539;179473538 |
N2A | 14832 | 44719;44720;44721 | chr2:178608813;178608812;178608811 | chr2:179473540;179473539;179473538 |
N2B | 8335 | 25228;25229;25230 | chr2:178608813;178608812;178608811 | chr2:179473540;179473539;179473538 |
Novex-1 | 8460 | 25603;25604;25605 | chr2:178608813;178608812;178608811 | chr2:179473540;179473539;179473538 |
Novex-2 | 8527 | 25804;25805;25806 | chr2:178608813;178608812;178608811 | chr2:179473540;179473539;179473538 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs773027240 | -0.141 | 0.999 | N | 0.613 | 0.54 | 0.414539908741 | gnomAD-2.1.1 | 2.86E-05 | None | None | None | None | I | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 5.47E-05 | 0 |
E/A | rs773027240 | -0.141 | 0.999 | N | 0.613 | 0.54 | 0.414539908741 | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 8.83E-05 | 0 | 0 |
E/A | rs773027240 | -0.141 | 0.999 | N | 0.613 | 0.54 | 0.414539908741 | gnomAD-4.0.0 | 1.2217E-04 | None | None | None | None | I | None | 6.68074E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.61116E-04 | 0 | 3.20513E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2853 | likely_benign | 0.2832 | benign | -0.461 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.481291425 | None | None | I |
E/C | 0.9219 | likely_pathogenic | 0.9175 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/D | 0.1392 | likely_benign | 0.1527 | benign | -0.408 | Destabilizing | 0.999 | D | 0.45 | neutral | N | 0.469727637 | None | None | I |
E/F | 0.9289 | likely_pathogenic | 0.9209 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | I |
E/G | 0.3859 | ambiguous | 0.3733 | ambiguous | -0.686 | Destabilizing | 1.0 | D | 0.603 | neutral | N | 0.504515001 | None | None | I |
E/H | 0.7117 | likely_pathogenic | 0.6944 | pathogenic | -0.019 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
E/I | 0.6513 | likely_pathogenic | 0.6508 | pathogenic | 0.107 | Stabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
E/K | 0.3603 | ambiguous | 0.3491 | ambiguous | 0.232 | Stabilizing | 0.999 | D | 0.601 | neutral | N | 0.430939962 | None | None | I |
E/L | 0.6908 | likely_pathogenic | 0.6746 | pathogenic | 0.107 | Stabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | I |
E/M | 0.7222 | likely_pathogenic | 0.7037 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | I |
E/N | 0.3996 | ambiguous | 0.407 | ambiguous | -0.187 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
E/P | 0.4962 | ambiguous | 0.4943 | ambiguous | -0.062 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | I |
E/Q | 0.2654 | likely_benign | 0.2559 | benign | -0.126 | Destabilizing | 1.0 | D | 0.602 | neutral | N | 0.50085862 | None | None | I |
E/R | 0.5295 | ambiguous | 0.4995 | ambiguous | 0.47 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
E/S | 0.3485 | ambiguous | 0.3458 | ambiguous | -0.346 | Destabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | I |
E/T | 0.4272 | ambiguous | 0.4416 | ambiguous | -0.157 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
E/V | 0.4368 | ambiguous | 0.4339 | ambiguous | -0.062 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.474562016 | None | None | I |
E/W | 0.9762 | likely_pathogenic | 0.9724 | pathogenic | -0.008 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
E/Y | 0.8541 | likely_pathogenic | 0.8443 | pathogenic | 0.045 | Stabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.