Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17401 | 52426;52427;52428 | chr2:178608810;178608809;178608808 | chr2:179473537;179473536;179473535 |
N2AB | 15760 | 47503;47504;47505 | chr2:178608810;178608809;178608808 | chr2:179473537;179473536;179473535 |
N2A | 14833 | 44722;44723;44724 | chr2:178608810;178608809;178608808 | chr2:179473537;179473536;179473535 |
N2B | 8336 | 25231;25232;25233 | chr2:178608810;178608809;178608808 | chr2:179473537;179473536;179473535 |
Novex-1 | 8461 | 25606;25607;25608 | chr2:178608810;178608809;178608808 | chr2:179473537;179473536;179473535 |
Novex-2 | 8528 | 25807;25808;25809 | chr2:178608810;178608809;178608808 | chr2:179473537;179473536;179473535 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1410389607 | None | 1.0 | D | 0.807 | 0.556 | 0.750041221393 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs1410389607 | None | 1.0 | D | 0.807 | 0.556 | 0.750041221393 | gnomAD-4.0.0 | 6.58146E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47228E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9873 | likely_pathogenic | 0.9898 | pathogenic | -2.488 | Highly Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
I/C | 0.9849 | likely_pathogenic | 0.9894 | pathogenic | -1.545 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
I/D | 0.9985 | likely_pathogenic | 0.9989 | pathogenic | -2.547 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
I/E | 0.996 | likely_pathogenic | 0.997 | pathogenic | -2.432 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
I/F | 0.9559 | likely_pathogenic | 0.9692 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.53358895 | None | None | I |
I/G | 0.9969 | likely_pathogenic | 0.9976 | pathogenic | -2.939 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
I/H | 0.9977 | likely_pathogenic | 0.9985 | pathogenic | -2.258 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
I/K | 0.992 | likely_pathogenic | 0.9941 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
I/L | 0.61 | likely_pathogenic | 0.6265 | pathogenic | -1.229 | Destabilizing | 0.993 | D | 0.383 | neutral | N | 0.482554641 | None | None | I |
I/M | 0.6541 | likely_pathogenic | 0.6908 | pathogenic | -0.906 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.536123845 | None | None | I |
I/N | 0.9668 | likely_pathogenic | 0.975 | pathogenic | -1.892 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.537137804 | None | None | I |
I/P | 0.9836 | likely_pathogenic | 0.9882 | pathogenic | -1.625 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
I/Q | 0.9957 | likely_pathogenic | 0.9969 | pathogenic | -1.951 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
I/R | 0.9918 | likely_pathogenic | 0.994 | pathogenic | -1.321 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
I/S | 0.9889 | likely_pathogenic | 0.9915 | pathogenic | -2.543 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.536377335 | None | None | I |
I/T | 0.9709 | likely_pathogenic | 0.9757 | pathogenic | -2.304 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.536377335 | None | None | I |
I/V | 0.1565 | likely_benign | 0.1656 | benign | -1.625 | Destabilizing | 0.993 | D | 0.374 | neutral | N | 0.500437333 | None | None | I |
I/W | 0.9983 | likely_pathogenic | 0.999 | pathogenic | -1.931 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
I/Y | 0.9916 | likely_pathogenic | 0.9945 | pathogenic | -1.704 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.