Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17403 | 52432;52433;52434 | chr2:178608804;178608803;178608802 | chr2:179473531;179473530;179473529 |
N2AB | 15762 | 47509;47510;47511 | chr2:178608804;178608803;178608802 | chr2:179473531;179473530;179473529 |
N2A | 14835 | 44728;44729;44730 | chr2:178608804;178608803;178608802 | chr2:179473531;179473530;179473529 |
N2B | 8338 | 25237;25238;25239 | chr2:178608804;178608803;178608802 | chr2:179473531;179473530;179473529 |
Novex-1 | 8463 | 25612;25613;25614 | chr2:178608804;178608803;178608802 | chr2:179473531;179473530;179473529 |
Novex-2 | 8530 | 25813;25814;25815 | chr2:178608804;178608803;178608802 | chr2:179473531;179473530;179473529 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs778111199 | -1.12 | 1.0 | N | 0.689 | 0.536 | 0.241664281697 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
N/K | None | None | 1.0 | N | 0.687 | 0.372 | 0.187945064343 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7529 | likely_pathogenic | 0.761 | pathogenic | -1.103 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
N/C | 0.4282 | ambiguous | 0.4475 | ambiguous | -0.636 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
N/D | 0.8362 | likely_pathogenic | 0.8466 | pathogenic | -1.888 | Destabilizing | 0.999 | D | 0.573 | neutral | N | 0.478775071 | None | None | I |
N/E | 0.9742 | likely_pathogenic | 0.9796 | pathogenic | -1.702 | Destabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | I |
N/F | 0.9256 | likely_pathogenic | 0.9308 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
N/G | 0.6337 | likely_pathogenic | 0.6095 | pathogenic | -1.453 | Destabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | I |
N/H | 0.4014 | ambiguous | 0.4014 | ambiguous | -0.994 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.518422874 | None | None | I |
N/I | 0.9103 | likely_pathogenic | 0.9225 | pathogenic | -0.184 | Destabilizing | 1.0 | D | 0.889 | deleterious | N | 0.491145334 | None | None | I |
N/K | 0.9568 | likely_pathogenic | 0.9597 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.514342418 | None | None | I |
N/L | 0.8209 | likely_pathogenic | 0.8243 | pathogenic | -0.184 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
N/M | 0.9067 | likely_pathogenic | 0.9137 | pathogenic | 0.107 | Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
N/P | 0.9921 | likely_pathogenic | 0.9935 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
N/Q | 0.8995 | likely_pathogenic | 0.9022 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
N/R | 0.8974 | likely_pathogenic | 0.9044 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
N/S | 0.1752 | likely_benign | 0.1747 | benign | -1.237 | Destabilizing | 0.999 | D | 0.533 | neutral | N | 0.505453576 | None | None | I |
N/T | 0.6529 | likely_pathogenic | 0.6648 | pathogenic | -0.874 | Destabilizing | 0.999 | D | 0.649 | neutral | N | 0.475559067 | None | None | I |
N/V | 0.8996 | likely_pathogenic | 0.9077 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
N/W | 0.9744 | likely_pathogenic | 0.9745 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
N/Y | 0.6247 | likely_pathogenic | 0.6555 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.878 | deleterious | N | 0.471293106 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.