Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17409 | 52450;52451;52452 | chr2:178608786;178608785;178608784 | chr2:179473513;179473512;179473511 |
N2AB | 15768 | 47527;47528;47529 | chr2:178608786;178608785;178608784 | chr2:179473513;179473512;179473511 |
N2A | 14841 | 44746;44747;44748 | chr2:178608786;178608785;178608784 | chr2:179473513;179473512;179473511 |
N2B | 8344 | 25255;25256;25257 | chr2:178608786;178608785;178608784 | chr2:179473513;179473512;179473511 |
Novex-1 | 8469 | 25630;25631;25632 | chr2:178608786;178608785;178608784 | chr2:179473513;179473512;179473511 |
Novex-2 | 8536 | 25831;25832;25833 | chr2:178608786;178608785;178608784 | chr2:179473513;179473512;179473511 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1203045644 | -1.986 | 0.999 | N | 0.534 | 0.462 | 0.392855499163 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
K/E | rs1203045644 | -1.986 | 0.999 | N | 0.534 | 0.462 | 0.392855499163 | gnomAD-4.0.0 | 3.18747E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72377E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7115 | likely_pathogenic | 0.7501 | pathogenic | -1.392 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/C | 0.6779 | likely_pathogenic | 0.7006 | pathogenic | -1.467 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
K/D | 0.9817 | likely_pathogenic | 0.9847 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/E | 0.5822 | likely_pathogenic | 0.6226 | pathogenic | -1.0 | Destabilizing | 0.999 | D | 0.534 | neutral | N | 0.472116027 | None | None | N |
K/F | 0.9063 | likely_pathogenic | 0.93 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
K/G | 0.8711 | likely_pathogenic | 0.8902 | pathogenic | -1.852 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
K/H | 0.611 | likely_pathogenic | 0.6512 | pathogenic | -1.977 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
K/I | 0.6364 | likely_pathogenic | 0.6911 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.925 | deleterious | N | 0.494058623 | None | None | N |
K/L | 0.5702 | likely_pathogenic | 0.6179 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
K/M | 0.2591 | likely_benign | 0.3086 | benign | -0.337 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
K/N | 0.8964 | likely_pathogenic | 0.9154 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.669 | neutral | N | 0.472662685 | None | None | N |
K/P | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
K/Q | 0.1741 | likely_benign | 0.2006 | benign | -1.285 | Destabilizing | 1.0 | D | 0.66 | neutral | N | 0.502279985 | None | None | N |
K/R | 0.0967 | likely_benign | 0.092 | benign | -0.991 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.408561748 | None | None | N |
K/S | 0.8673 | likely_pathogenic | 0.8914 | pathogenic | -2.155 | Highly Destabilizing | 0.999 | D | 0.54 | neutral | None | None | None | None | N |
K/T | 0.5884 | likely_pathogenic | 0.6229 | pathogenic | -1.649 | Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.473890453 | None | None | N |
K/V | 0.5954 | likely_pathogenic | 0.6327 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
K/W | 0.8917 | likely_pathogenic | 0.8995 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
K/Y | 0.7836 | likely_pathogenic | 0.8244 | pathogenic | -0.408 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.