Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17419 | 52480;52481;52482 | chr2:178608756;178608755;178608754 | chr2:179473483;179473482;179473481 |
N2AB | 15778 | 47557;47558;47559 | chr2:178608756;178608755;178608754 | chr2:179473483;179473482;179473481 |
N2A | 14851 | 44776;44777;44778 | chr2:178608756;178608755;178608754 | chr2:179473483;179473482;179473481 |
N2B | 8354 | 25285;25286;25287 | chr2:178608756;178608755;178608754 | chr2:179473483;179473482;179473481 |
Novex-1 | 8479 | 25660;25661;25662 | chr2:178608756;178608755;178608754 | chr2:179473483;179473482;179473481 |
Novex-2 | 8546 | 25861;25862;25863 | chr2:178608756;178608755;178608754 | chr2:179473483;179473482;179473481 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1162756483 | -1.05 | 0.012 | N | 0.306 | 0.087 | 0.678712887374 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.56E-05 | 0 |
I/T | rs1162756483 | -1.05 | 0.012 | N | 0.306 | 0.087 | 0.678712887374 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1162756483 | -1.05 | 0.012 | N | 0.306 | 0.087 | 0.678712887374 | gnomAD-4.0.0 | 5.58129E-06 | None | None | None | None | I | None | 2.67265E-05 | 0 | None | 0 | 2.24225E-05 | None | 0 | 0 | 5.08807E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2762 | likely_benign | 0.2899 | benign | -1.273 | Destabilizing | 0.007 | N | 0.296 | neutral | None | None | None | None | I |
I/C | 0.6376 | likely_pathogenic | 0.6538 | pathogenic | -0.788 | Destabilizing | 0.356 | N | 0.334 | neutral | None | None | None | None | I |
I/D | 0.7246 | likely_pathogenic | 0.7268 | pathogenic | -0.665 | Destabilizing | None | N | 0.367 | neutral | None | None | None | None | I |
I/E | 0.5614 | ambiguous | 0.5713 | pathogenic | -0.663 | Destabilizing | 0.038 | N | 0.323 | neutral | None | None | None | None | I |
I/F | 0.2019 | likely_benign | 0.2102 | benign | -0.768 | Destabilizing | 0.171 | N | 0.311 | neutral | N | 0.4797312 | None | None | I |
I/G | 0.5936 | likely_pathogenic | 0.5977 | pathogenic | -1.567 | Destabilizing | 0.072 | N | 0.339 | neutral | None | None | None | None | I |
I/H | 0.4795 | ambiguous | 0.4906 | ambiguous | -0.636 | Destabilizing | 0.628 | D | 0.359 | neutral | None | None | None | None | I |
I/K | 0.4782 | ambiguous | 0.478 | ambiguous | -0.878 | Destabilizing | 0.072 | N | 0.339 | neutral | None | None | None | None | I |
I/L | 0.1254 | likely_benign | 0.1367 | benign | -0.554 | Destabilizing | 0.002 | N | 0.175 | neutral | N | 0.480480561 | None | None | I |
I/M | 0.074 | likely_benign | 0.0823 | benign | -0.523 | Destabilizing | 0.002 | N | 0.179 | neutral | N | 0.505032289 | None | None | I |
I/N | 0.2356 | likely_benign | 0.2447 | benign | -0.785 | Destabilizing | 0.029 | N | 0.385 | neutral | N | 0.511667473 | None | None | I |
I/P | 0.9336 | likely_pathogenic | 0.9261 | pathogenic | -0.762 | Destabilizing | 0.356 | N | 0.409 | neutral | None | None | None | None | I |
I/Q | 0.3849 | ambiguous | 0.4143 | ambiguous | -0.932 | Destabilizing | 0.214 | N | 0.407 | neutral | None | None | None | None | I |
I/R | 0.4098 | ambiguous | 0.4097 | ambiguous | -0.282 | Destabilizing | 0.214 | N | 0.405 | neutral | None | None | None | None | I |
I/S | 0.265 | likely_benign | 0.2695 | benign | -1.357 | Destabilizing | 0.001 | N | 0.283 | neutral | N | 0.476248177 | None | None | I |
I/T | 0.1759 | likely_benign | 0.1816 | benign | -1.24 | Destabilizing | 0.012 | N | 0.306 | neutral | N | 0.447618781 | None | None | I |
I/V | 0.0877 | likely_benign | 0.0905 | benign | -0.762 | Destabilizing | None | N | 0.151 | neutral | N | 0.430129098 | None | None | I |
I/W | 0.7528 | likely_pathogenic | 0.7588 | pathogenic | -0.838 | Destabilizing | 0.864 | D | 0.389 | neutral | None | None | None | None | I |
I/Y | 0.5124 | ambiguous | 0.5301 | ambiguous | -0.611 | Destabilizing | 0.356 | N | 0.367 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.