Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17421 | 52486;52487;52488 | chr2:178608750;178608749;178608748 | chr2:179473477;179473476;179473475 |
N2AB | 15780 | 47563;47564;47565 | chr2:178608750;178608749;178608748 | chr2:179473477;179473476;179473475 |
N2A | 14853 | 44782;44783;44784 | chr2:178608750;178608749;178608748 | chr2:179473477;179473476;179473475 |
N2B | 8356 | 25291;25292;25293 | chr2:178608750;178608749;178608748 | chr2:179473477;179473476;179473475 |
Novex-1 | 8481 | 25666;25667;25668 | chr2:178608750;178608749;178608748 | chr2:179473477;179473476;179473475 |
Novex-2 | 8548 | 25867;25868;25869 | chr2:178608750;178608749;178608748 | chr2:179473477;179473476;179473475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs1340432964 | None | 0.638 | N | 0.795 | 0.303 | 0.501624679856 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/F | rs1340432964 | None | 0.638 | N | 0.795 | 0.303 | 0.501624679856 | gnomAD-4.0.0 | 8.06204E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.01761E-05 | 0 | 1.60298E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6216 | likely_pathogenic | 0.5538 | ambiguous | -1.431 | Destabilizing | 0.334 | N | 0.46 | neutral | N | 0.502973419 | None | None | N |
V/C | 0.8809 | likely_pathogenic | 0.8668 | pathogenic | -1.014 | Destabilizing | 0.982 | D | 0.794 | deleterious | None | None | None | None | N |
V/D | 0.9762 | likely_pathogenic | 0.9733 | pathogenic | -1.272 | Destabilizing | 0.781 | D | 0.812 | deleterious | N | 0.509578757 | None | None | N |
V/E | 0.9335 | likely_pathogenic | 0.9315 | pathogenic | -1.17 | Destabilizing | 0.826 | D | 0.769 | deleterious | None | None | None | None | N |
V/F | 0.6141 | likely_pathogenic | 0.5912 | pathogenic | -0.886 | Destabilizing | 0.638 | D | 0.795 | deleterious | N | 0.482356242 | None | None | N |
V/G | 0.8511 | likely_pathogenic | 0.8074 | pathogenic | -1.841 | Destabilizing | 0.781 | D | 0.783 | deleterious | N | 0.487119636 | None | None | N |
V/H | 0.9726 | likely_pathogenic | 0.9699 | pathogenic | -1.345 | Destabilizing | 0.982 | D | 0.803 | deleterious | None | None | None | None | N |
V/I | 0.084 | likely_benign | 0.0905 | benign | -0.367 | Destabilizing | 0.002 | N | 0.239 | neutral | N | 0.492583067 | None | None | N |
V/K | 0.9621 | likely_pathogenic | 0.9577 | pathogenic | -1.229 | Destabilizing | 0.826 | D | 0.779 | deleterious | None | None | None | None | N |
V/L | 0.3905 | ambiguous | 0.4072 | ambiguous | -0.367 | Destabilizing | 0.034 | N | 0.403 | neutral | N | 0.458027776 | None | None | N |
V/M | 0.3999 | ambiguous | 0.3726 | ambiguous | -0.363 | Destabilizing | 0.7 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/N | 0.9133 | likely_pathogenic | 0.9083 | pathogenic | -1.292 | Destabilizing | 0.935 | D | 0.817 | deleterious | None | None | None | None | N |
V/P | 0.9664 | likely_pathogenic | 0.9617 | pathogenic | -0.688 | Destabilizing | 0.935 | D | 0.804 | deleterious | None | None | None | None | N |
V/Q | 0.9198 | likely_pathogenic | 0.9137 | pathogenic | -1.28 | Destabilizing | 0.935 | D | 0.807 | deleterious | None | None | None | None | N |
V/R | 0.9502 | likely_pathogenic | 0.9477 | pathogenic | -0.889 | Destabilizing | 0.826 | D | 0.819 | deleterious | None | None | None | None | N |
V/S | 0.8062 | likely_pathogenic | 0.7724 | pathogenic | -1.885 | Destabilizing | 0.826 | D | 0.757 | deleterious | None | None | None | None | N |
V/T | 0.6406 | likely_pathogenic | 0.5958 | pathogenic | -1.647 | Destabilizing | 0.399 | N | 0.563 | neutral | None | None | None | None | N |
V/W | 0.9867 | likely_pathogenic | 0.9856 | pathogenic | -1.207 | Destabilizing | 0.982 | D | 0.784 | deleterious | None | None | None | None | N |
V/Y | 0.9403 | likely_pathogenic | 0.9389 | pathogenic | -0.829 | Destabilizing | 0.826 | D | 0.81 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.