Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17423 | 52492;52493;52494 | chr2:178608744;178608743;178608742 | chr2:179473471;179473470;179473469 |
N2AB | 15782 | 47569;47570;47571 | chr2:178608744;178608743;178608742 | chr2:179473471;179473470;179473469 |
N2A | 14855 | 44788;44789;44790 | chr2:178608744;178608743;178608742 | chr2:179473471;179473470;179473469 |
N2B | 8358 | 25297;25298;25299 | chr2:178608744;178608743;178608742 | chr2:179473471;179473470;179473469 |
Novex-1 | 8483 | 25672;25673;25674 | chr2:178608744;178608743;178608742 | chr2:179473471;179473470;179473469 |
Novex-2 | 8550 | 25873;25874;25875 | chr2:178608744;178608743;178608742 | chr2:179473471;179473470;179473469 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.317 | D | 0.343 | 0.203 | 0.262175524916 | gnomAD-4.0.0 | 1.59378E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86207E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0955 | likely_benign | 0.0777 | benign | -0.475 | Destabilizing | None | N | 0.13 | neutral | N | 0.480787205 | None | None | I |
S/C | 0.2658 | likely_benign | 0.2272 | benign | -0.244 | Destabilizing | 0.824 | D | 0.327 | neutral | None | None | None | None | I |
S/D | 0.6952 | likely_pathogenic | 0.7147 | pathogenic | -0.283 | Destabilizing | 0.149 | N | 0.372 | neutral | None | None | None | None | I |
S/E | 0.7593 | likely_pathogenic | 0.7662 | pathogenic | -0.381 | Destabilizing | 0.149 | N | 0.377 | neutral | None | None | None | None | I |
S/F | 0.6841 | likely_pathogenic | 0.6166 | pathogenic | -1.126 | Destabilizing | 0.38 | N | 0.408 | neutral | None | None | None | None | I |
S/G | 0.1307 | likely_benign | 0.1185 | benign | -0.573 | Destabilizing | 0.081 | N | 0.376 | neutral | None | None | None | None | I |
S/H | 0.6665 | likely_pathogenic | 0.665 | pathogenic | -1.17 | Destabilizing | 0.935 | D | 0.333 | neutral | None | None | None | None | I |
S/I | 0.6599 | likely_pathogenic | 0.5864 | pathogenic | -0.339 | Destabilizing | 0.081 | N | 0.415 | neutral | None | None | None | None | I |
S/K | 0.8802 | likely_pathogenic | 0.8905 | pathogenic | -0.485 | Destabilizing | 0.149 | N | 0.376 | neutral | None | None | None | None | I |
S/L | 0.3097 | likely_benign | 0.2597 | benign | -0.339 | Destabilizing | None | N | 0.257 | neutral | N | 0.480137288 | None | None | I |
S/M | 0.4399 | ambiguous | 0.3787 | ambiguous | 0.167 | Stabilizing | 0.38 | N | 0.328 | neutral | None | None | None | None | I |
S/N | 0.2984 | likely_benign | 0.2974 | benign | -0.242 | Destabilizing | 0.262 | N | 0.442 | neutral | None | None | None | None | I |
S/P | 0.5367 | ambiguous | 0.5213 | ambiguous | -0.357 | Destabilizing | 0.317 | N | 0.343 | neutral | D | 0.524348768 | None | None | I |
S/Q | 0.6867 | likely_pathogenic | 0.6823 | pathogenic | -0.608 | Destabilizing | 0.555 | D | 0.335 | neutral | None | None | None | None | I |
S/R | 0.868 | likely_pathogenic | 0.8797 | pathogenic | -0.218 | Destabilizing | 0.38 | N | 0.343 | neutral | None | None | None | None | I |
S/T | 0.1314 | likely_benign | 0.1173 | benign | -0.335 | Destabilizing | 0.002 | N | 0.229 | neutral | N | 0.460374648 | None | None | I |
S/V | 0.5027 | ambiguous | 0.4176 | ambiguous | -0.357 | Destabilizing | 0.081 | N | 0.411 | neutral | None | None | None | None | I |
S/W | 0.7842 | likely_pathogenic | 0.7616 | pathogenic | -1.094 | Destabilizing | 0.935 | D | 0.533 | neutral | None | None | None | None | I |
S/Y | 0.5756 | likely_pathogenic | 0.5397 | ambiguous | -0.819 | Destabilizing | 0.555 | D | 0.401 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.