Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17424 | 52495;52496;52497 | chr2:178608741;178608740;178608739 | chr2:179473468;179473467;179473466 |
N2AB | 15783 | 47572;47573;47574 | chr2:178608741;178608740;178608739 | chr2:179473468;179473467;179473466 |
N2A | 14856 | 44791;44792;44793 | chr2:178608741;178608740;178608739 | chr2:179473468;179473467;179473466 |
N2B | 8359 | 25300;25301;25302 | chr2:178608741;178608740;178608739 | chr2:179473468;179473467;179473466 |
Novex-1 | 8484 | 25675;25676;25677 | chr2:178608741;178608740;178608739 | chr2:179473468;179473467;179473466 |
Novex-2 | 8551 | 25876;25877;25878 | chr2:178608741;178608740;178608739 | chr2:179473468;179473467;179473466 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1559751874 | None | 0.204 | N | 0.248 | 0.259 | 0.359151904892 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
T/I | rs1559751874 | None | 0.204 | N | 0.248 | 0.259 | 0.359151904892 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1559751874 | None | 0.204 | N | 0.248 | 0.259 | 0.359151904892 | gnomAD-4.0.0 | 2.48061E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54402E-06 | 1.09823E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1821 | likely_benign | 0.1579 | benign | -0.454 | Destabilizing | 0.63 | D | 0.381 | neutral | N | 0.509283315 | None | None | I |
T/C | 0.7604 | likely_pathogenic | 0.7096 | pathogenic | -0.186 | Destabilizing | 0.999 | D | 0.423 | neutral | None | None | None | None | I |
T/D | 0.8126 | likely_pathogenic | 0.8129 | pathogenic | 0.142 | Stabilizing | 0.975 | D | 0.371 | neutral | None | None | None | None | I |
T/E | 0.8032 | likely_pathogenic | 0.7974 | pathogenic | 0.057 | Stabilizing | 0.975 | D | 0.367 | neutral | None | None | None | None | I |
T/F | 0.6796 | likely_pathogenic | 0.6257 | pathogenic | -1.024 | Destabilizing | 0.987 | D | 0.489 | neutral | None | None | None | None | I |
T/G | 0.434 | ambiguous | 0.4254 | ambiguous | -0.563 | Destabilizing | 0.845 | D | 0.4 | neutral | None | None | None | None | I |
T/H | 0.6408 | likely_pathogenic | 0.6073 | pathogenic | -0.938 | Destabilizing | 0.999 | D | 0.484 | neutral | None | None | None | None | I |
T/I | 0.6083 | likely_pathogenic | 0.5291 | ambiguous | -0.284 | Destabilizing | 0.204 | N | 0.248 | neutral | N | 0.509323388 | None | None | I |
T/K | 0.6849 | likely_pathogenic | 0.6899 | pathogenic | -0.271 | Destabilizing | 0.967 | D | 0.371 | neutral | N | 0.505626935 | None | None | I |
T/L | 0.3248 | likely_benign | 0.2804 | benign | -0.284 | Destabilizing | 0.845 | D | 0.405 | neutral | None | None | None | None | I |
T/M | 0.2453 | likely_benign | 0.2034 | benign | 0.062 | Stabilizing | 0.997 | D | 0.396 | neutral | None | None | None | None | I |
T/N | 0.3301 | likely_benign | 0.3084 | benign | -0.024 | Destabilizing | 0.975 | D | 0.359 | neutral | None | None | None | None | I |
T/P | 0.4209 | ambiguous | 0.3803 | ambiguous | -0.314 | Destabilizing | 0.983 | D | 0.395 | neutral | N | 0.487211745 | None | None | I |
T/Q | 0.5901 | likely_pathogenic | 0.5615 | ambiguous | -0.31 | Destabilizing | 0.975 | D | 0.389 | neutral | None | None | None | None | I |
T/R | 0.6371 | likely_pathogenic | 0.6366 | pathogenic | -0.003 | Destabilizing | 0.967 | D | 0.39 | neutral | N | 0.509976749 | None | None | I |
T/S | 0.2217 | likely_benign | 0.2126 | benign | -0.248 | Destabilizing | 0.099 | N | 0.293 | neutral | N | 0.49211892 | None | None | I |
T/V | 0.4188 | ambiguous | 0.3601 | ambiguous | -0.314 | Destabilizing | 0.845 | D | 0.369 | neutral | None | None | None | None | I |
T/W | 0.9243 | likely_pathogenic | 0.9094 | pathogenic | -0.997 | Destabilizing | 0.999 | D | 0.566 | neutral | None | None | None | None | I |
T/Y | 0.7241 | likely_pathogenic | 0.6918 | pathogenic | -0.713 | Destabilizing | 0.996 | D | 0.499 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.