Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17426 | 52501;52502;52503 | chr2:178608735;178608734;178608733 | chr2:179473462;179473461;179473460 |
N2AB | 15785 | 47578;47579;47580 | chr2:178608735;178608734;178608733 | chr2:179473462;179473461;179473460 |
N2A | 14858 | 44797;44798;44799 | chr2:178608735;178608734;178608733 | chr2:179473462;179473461;179473460 |
N2B | 8361 | 25306;25307;25308 | chr2:178608735;178608734;178608733 | chr2:179473462;179473461;179473460 |
Novex-1 | 8486 | 25681;25682;25683 | chr2:178608735;178608734;178608733 | chr2:179473462;179473461;179473460 |
Novex-2 | 8553 | 25882;25883;25884 | chr2:178608735;178608734;178608733 | chr2:179473462;179473461;179473460 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.967 | N | 0.605 | 0.336 | 0.32980341726 | gnomAD-4.0.0 | 1.59378E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.862E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7246 | likely_pathogenic | 0.7872 | pathogenic | 0.088 | Stabilizing | 0.845 | D | 0.569 | neutral | None | None | None | None | I |
R/C | 0.3645 | ambiguous | 0.3903 | ambiguous | 0.087 | Stabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
R/D | 0.9022 | likely_pathogenic | 0.9309 | pathogenic | 0.037 | Stabilizing | 0.975 | D | 0.614 | neutral | None | None | None | None | I |
R/E | 0.6869 | likely_pathogenic | 0.7483 | pathogenic | 0.121 | Stabilizing | 0.845 | D | 0.553 | neutral | None | None | None | None | I |
R/F | 0.8293 | likely_pathogenic | 0.8669 | pathogenic | -0.005 | Destabilizing | 0.996 | D | 0.629 | neutral | None | None | None | None | I |
R/G | 0.5631 | ambiguous | 0.6293 | pathogenic | -0.146 | Destabilizing | 0.892 | D | 0.524 | neutral | N | 0.465743182 | None | None | I |
R/H | 0.2216 | likely_benign | 0.2431 | benign | -0.749 | Destabilizing | 0.987 | D | 0.64 | neutral | None | None | None | None | I |
R/I | 0.5701 | likely_pathogenic | 0.6273 | pathogenic | 0.68 | Stabilizing | 0.983 | D | 0.639 | neutral | N | 0.483771582 | None | None | I |
R/K | 0.1779 | likely_benign | 0.1911 | benign | 0.099 | Stabilizing | 0.025 | N | 0.212 | neutral | N | 0.377489479 | None | None | I |
R/L | 0.4682 | ambiguous | 0.5126 | ambiguous | 0.68 | Stabilizing | 0.916 | D | 0.524 | neutral | None | None | None | None | I |
R/M | 0.6033 | likely_pathogenic | 0.6686 | pathogenic | 0.182 | Stabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | I |
R/N | 0.8315 | likely_pathogenic | 0.8797 | pathogenic | 0.413 | Stabilizing | 0.975 | D | 0.595 | neutral | None | None | None | None | I |
R/P | 0.7095 | likely_pathogenic | 0.7769 | pathogenic | 0.504 | Stabilizing | 0.987 | D | 0.624 | neutral | None | None | None | None | I |
R/Q | 0.1923 | likely_benign | 0.2096 | benign | 0.327 | Stabilizing | 0.975 | D | 0.596 | neutral | None | None | None | None | I |
R/S | 0.7698 | likely_pathogenic | 0.8231 | pathogenic | 0.057 | Stabilizing | 0.892 | D | 0.603 | neutral | N | 0.442383533 | None | None | I |
R/T | 0.5522 | ambiguous | 0.6378 | pathogenic | 0.289 | Stabilizing | 0.967 | D | 0.605 | neutral | N | 0.43534013 | None | None | I |
R/V | 0.6615 | likely_pathogenic | 0.7154 | pathogenic | 0.504 | Stabilizing | 0.975 | D | 0.642 | neutral | None | None | None | None | I |
R/W | 0.3635 | ambiguous | 0.3954 | ambiguous | -0.024 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | I |
R/Y | 0.6772 | likely_pathogenic | 0.7282 | pathogenic | 0.374 | Stabilizing | 0.996 | D | 0.627 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.