Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17427 | 52504;52505;52506 | chr2:178608732;178608731;178608730 | chr2:179473459;179473458;179473457 |
N2AB | 15786 | 47581;47582;47583 | chr2:178608732;178608731;178608730 | chr2:179473459;179473458;179473457 |
N2A | 14859 | 44800;44801;44802 | chr2:178608732;178608731;178608730 | chr2:179473459;179473458;179473457 |
N2B | 8362 | 25309;25310;25311 | chr2:178608732;178608731;178608730 | chr2:179473459;179473458;179473457 |
Novex-1 | 8487 | 25684;25685;25686 | chr2:178608732;178608731;178608730 | chr2:179473459;179473458;179473457 |
Novex-2 | 8554 | 25885;25886;25887 | chr2:178608732;178608731;178608730 | chr2:179473459;179473458;179473457 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs1387146828 | -0.517 | 0.029 | N | 0.253 | 0.179 | 0.245101548738 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/R | rs1387146828 | -0.517 | 0.029 | N | 0.253 | 0.179 | 0.245101548738 | gnomAD-4.0.0 | 1.59384E-06 | None | None | None | None | I | None | 0 | 2.28969E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1671 | likely_benign | 0.1934 | benign | 0.221 | Stabilizing | 0.016 | N | 0.303 | neutral | None | None | None | None | I |
H/C | 0.1895 | likely_benign | 0.1881 | benign | 0.508 | Stabilizing | 0.864 | D | 0.437 | neutral | None | None | None | None | I |
H/D | 0.162 | likely_benign | 0.2057 | benign | -0.458 | Destabilizing | 0.012 | N | 0.36 | neutral | N | 0.386994397 | None | None | I |
H/E | 0.2307 | likely_benign | 0.2722 | benign | -0.411 | Destabilizing | 0.016 | N | 0.287 | neutral | None | None | None | None | I |
H/F | 0.2414 | likely_benign | 0.2433 | benign | 1.105 | Stabilizing | 0.628 | D | 0.447 | neutral | None | None | None | None | I |
H/G | 0.1622 | likely_benign | 0.1941 | benign | -0.059 | Destabilizing | None | N | 0.267 | neutral | None | None | None | None | I |
H/I | 0.2565 | likely_benign | 0.2639 | benign | 0.951 | Stabilizing | 0.356 | N | 0.472 | neutral | None | None | None | None | I |
H/K | 0.2383 | likely_benign | 0.2661 | benign | 0.195 | Stabilizing | 0.016 | N | 0.357 | neutral | None | None | None | None | I |
H/L | 0.1085 | likely_benign | 0.116 | benign | 0.951 | Stabilizing | 0.055 | N | 0.437 | neutral | N | 0.471591719 | None | None | I |
H/M | 0.3502 | ambiguous | 0.3673 | ambiguous | 0.523 | Stabilizing | 0.356 | N | 0.42 | neutral | None | None | None | None | I |
H/N | 0.0601 | likely_benign | 0.074 | benign | -0.066 | Destabilizing | None | N | 0.105 | neutral | N | 0.428918377 | None | None | I |
H/P | 0.2538 | likely_benign | 0.2818 | benign | 0.73 | Stabilizing | 0.106 | N | 0.503 | neutral | N | 0.45031237 | None | None | I |
H/Q | 0.1384 | likely_benign | 0.1447 | benign | 0.069 | Stabilizing | 0.001 | N | 0.133 | neutral | N | 0.399422189 | None | None | I |
H/R | 0.143 | likely_benign | 0.1555 | benign | -0.385 | Destabilizing | 0.029 | N | 0.253 | neutral | N | 0.402905212 | None | None | I |
H/S | 0.1224 | likely_benign | 0.1462 | benign | 0.116 | Stabilizing | 0.016 | N | 0.337 | neutral | None | None | None | None | I |
H/T | 0.1603 | likely_benign | 0.186 | benign | 0.265 | Stabilizing | 0.038 | N | 0.406 | neutral | None | None | None | None | I |
H/V | 0.1853 | likely_benign | 0.1959 | benign | 0.73 | Stabilizing | 0.072 | N | 0.487 | neutral | None | None | None | None | I |
H/W | 0.4483 | ambiguous | 0.4385 | ambiguous | 1.135 | Stabilizing | 0.864 | D | 0.421 | neutral | None | None | None | None | I |
H/Y | 0.1013 | likely_benign | 0.1017 | benign | 1.287 | Stabilizing | 0.106 | N | 0.36 | neutral | N | 0.472631869 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.