Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17428 | 52507;52508;52509 | chr2:178608729;178608728;178608727 | chr2:179473456;179473455;179473454 |
N2AB | 15787 | 47584;47585;47586 | chr2:178608729;178608728;178608727 | chr2:179473456;179473455;179473454 |
N2A | 14860 | 44803;44804;44805 | chr2:178608729;178608728;178608727 | chr2:179473456;179473455;179473454 |
N2B | 8363 | 25312;25313;25314 | chr2:178608729;178608728;178608727 | chr2:179473456;179473455;179473454 |
Novex-1 | 8488 | 25687;25688;25689 | chr2:178608729;178608728;178608727 | chr2:179473456;179473455;179473454 |
Novex-2 | 8555 | 25888;25889;25890 | chr2:178608729;178608728;178608727 | chr2:179473456;179473455;179473454 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs2055534842 | None | 1.0 | N | 0.791 | 0.378 | 0.78109972193 | gnomAD-4.0.0 | 3.18769E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58098E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5398 | ambiguous | 0.5904 | pathogenic | -1.659 | Destabilizing | 0.998 | D | 0.51 | neutral | None | None | None | None | I |
C/D | 0.8558 | likely_pathogenic | 0.8901 | pathogenic | -1.385 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
C/E | 0.8658 | likely_pathogenic | 0.8988 | pathogenic | -1.185 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
C/F | 0.4968 | ambiguous | 0.5444 | ambiguous | -1.095 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.504295996 | None | None | I |
C/G | 0.238 | likely_benign | 0.2634 | benign | -1.986 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.461512828 | None | None | I |
C/H | 0.6452 | likely_pathogenic | 0.6765 | pathogenic | -1.857 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
C/I | 0.8319 | likely_pathogenic | 0.8499 | pathogenic | -0.774 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
C/K | 0.8197 | likely_pathogenic | 0.8525 | pathogenic | -1.154 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
C/L | 0.5404 | ambiguous | 0.5783 | pathogenic | -0.774 | Destabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | I |
C/M | 0.7286 | likely_pathogenic | 0.7677 | pathogenic | 0.316 | Stabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
C/N | 0.5072 | ambiguous | 0.5506 | ambiguous | -1.737 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
C/P | 0.7263 | likely_pathogenic | 0.7695 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
C/Q | 0.6341 | likely_pathogenic | 0.6718 | pathogenic | -1.4 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
C/R | 0.5089 | ambiguous | 0.5343 | ambiguous | -1.219 | Destabilizing | 1.0 | D | 0.832 | deleterious | N | 0.442111387 | None | None | I |
C/S | 0.3853 | ambiguous | 0.4145 | ambiguous | -2.099 | Highly Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.482765931 | None | None | I |
C/T | 0.4165 | ambiguous | 0.4656 | ambiguous | -1.723 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
C/V | 0.6845 | likely_pathogenic | 0.7235 | pathogenic | -1.048 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | I |
C/W | 0.7809 | likely_pathogenic | 0.8071 | pathogenic | -1.33 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.468767756 | None | None | I |
C/Y | 0.5548 | ambiguous | 0.6168 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.490385336 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.