Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17439 | 52540;52541;52542 | chr2:178608696;178608695;178608694 | chr2:179473423;179473422;179473421 |
N2AB | 15798 | 47617;47618;47619 | chr2:178608696;178608695;178608694 | chr2:179473423;179473422;179473421 |
N2A | 14871 | 44836;44837;44838 | chr2:178608696;178608695;178608694 | chr2:179473423;179473422;179473421 |
N2B | 8374 | 25345;25346;25347 | chr2:178608696;178608695;178608694 | chr2:179473423;179473422;179473421 |
Novex-1 | 8499 | 25720;25721;25722 | chr2:178608696;178608695;178608694 | chr2:179473423;179473422;179473421 |
Novex-2 | 8566 | 25921;25922;25923 | chr2:178608696;178608695;178608694 | chr2:179473423;179473422;179473421 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.983 | N | 0.648 | 0.252 | 0.192905019026 | gnomAD-4.0.0 | 1.23264E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.61988E-05 | 0 | 0 |
K/T | rs1293294438 | -0.884 | 0.983 | N | 0.614 | 0.536 | 0.273503213844 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
K/T | rs1293294438 | -0.884 | 0.983 | N | 0.614 | 0.536 | 0.273503213844 | gnomAD-4.0.0 | 1.59437E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86277E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7157 | likely_pathogenic | 0.648 | pathogenic | -0.902 | Destabilizing | 0.916 | D | 0.495 | neutral | None | None | None | None | N |
K/C | 0.7543 | likely_pathogenic | 0.6959 | pathogenic | -0.802 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/D | 0.8812 | likely_pathogenic | 0.8657 | pathogenic | -0.334 | Destabilizing | 0.996 | D | 0.657 | neutral | None | None | None | None | N |
K/E | 0.4074 | ambiguous | 0.3742 | ambiguous | -0.172 | Destabilizing | 0.944 | D | 0.481 | neutral | N | 0.51063011 | None | None | N |
K/F | 0.9393 | likely_pathogenic | 0.914 | pathogenic | -0.435 | Destabilizing | 0.95 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/G | 0.7852 | likely_pathogenic | 0.7382 | pathogenic | -1.319 | Destabilizing | 0.987 | D | 0.623 | neutral | None | None | None | None | N |
K/H | 0.4417 | ambiguous | 0.3994 | ambiguous | -1.575 | Destabilizing | 0.975 | D | 0.654 | neutral | None | None | None | None | N |
K/I | 0.7342 | likely_pathogenic | 0.6708 | pathogenic | 0.211 | Stabilizing | 0.967 | D | 0.719 | prob.delet. | N | 0.475420936 | None | None | N |
K/L | 0.715 | likely_pathogenic | 0.6575 | pathogenic | 0.211 | Stabilizing | 0.845 | D | 0.574 | neutral | None | None | None | None | N |
K/M | 0.4634 | ambiguous | 0.3937 | ambiguous | 0.099 | Stabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
K/N | 0.6995 | likely_pathogenic | 0.6649 | pathogenic | -0.801 | Destabilizing | 0.983 | D | 0.648 | neutral | N | 0.490313553 | None | None | N |
K/P | 0.9884 | likely_pathogenic | 0.9824 | pathogenic | -0.131 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
K/Q | 0.2249 | likely_benign | 0.199 | benign | -0.767 | Destabilizing | 0.983 | D | 0.645 | neutral | N | 0.498047601 | None | None | N |
K/R | 0.0953 | likely_benign | 0.0878 | benign | -0.761 | Destabilizing | 0.944 | D | 0.531 | neutral | N | 0.498276888 | None | None | N |
K/S | 0.7186 | likely_pathogenic | 0.6653 | pathogenic | -1.507 | Destabilizing | 0.957 | D | 0.53 | neutral | None | None | None | None | N |
K/T | 0.4549 | ambiguous | 0.3875 | ambiguous | -1.111 | Destabilizing | 0.983 | D | 0.614 | neutral | N | 0.441012522 | None | None | N |
K/V | 0.6498 | likely_pathogenic | 0.5729 | pathogenic | -0.131 | Destabilizing | 0.975 | D | 0.625 | neutral | None | None | None | None | N |
K/W | 0.8978 | likely_pathogenic | 0.8593 | pathogenic | -0.301 | Destabilizing | 0.997 | D | 0.72 | prob.delet. | None | None | None | None | N |
K/Y | 0.8185 | likely_pathogenic | 0.7763 | pathogenic | -0.02 | Destabilizing | 0.073 | N | 0.322 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.