Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17443 | 52552;52553;52554 | chr2:178608684;178608683;178608682 | chr2:179473411;179473410;179473409 |
N2AB | 15802 | 47629;47630;47631 | chr2:178608684;178608683;178608682 | chr2:179473411;179473410;179473409 |
N2A | 14875 | 44848;44849;44850 | chr2:178608684;178608683;178608682 | chr2:179473411;179473410;179473409 |
N2B | 8378 | 25357;25358;25359 | chr2:178608684;178608683;178608682 | chr2:179473411;179473410;179473409 |
Novex-1 | 8503 | 25732;25733;25734 | chr2:178608684;178608683;178608682 | chr2:179473411;179473410;179473409 |
Novex-2 | 8570 | 25933;25934;25935 | chr2:178608684;178608683;178608682 | chr2:179473411;179473410;179473409 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.991 | D | 0.86 | 0.596 | 0.811158110691 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9975 | likely_pathogenic | 0.9979 | pathogenic | -1.651 | Destabilizing | 0.953 | D | 0.839 | deleterious | None | None | None | None | N |
F/C | 0.9737 | likely_pathogenic | 0.9773 | pathogenic | -0.56 | Destabilizing | 0.999 | D | 0.858 | deleterious | D | 0.541048143 | None | None | N |
F/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -2.646 | Highly Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
F/E | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -2.411 | Highly Destabilizing | 0.993 | D | 0.872 | deleterious | None | None | None | None | N |
F/G | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -2.075 | Highly Destabilizing | 0.993 | D | 0.867 | deleterious | None | None | None | None | N |
F/H | 0.9964 | likely_pathogenic | 0.9969 | pathogenic | -1.902 | Destabilizing | 0.986 | D | 0.821 | deleterious | None | None | None | None | N |
F/I | 0.9055 | likely_pathogenic | 0.9178 | pathogenic | -0.262 | Destabilizing | 0.982 | D | 0.73 | prob.delet. | N | 0.50469414 | None | None | N |
F/K | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.538 | Destabilizing | 0.993 | D | 0.871 | deleterious | None | None | None | None | N |
F/L | 0.9729 | likely_pathogenic | 0.9804 | pathogenic | -0.262 | Destabilizing | 0.885 | D | 0.725 | prob.delet. | N | 0.50365741 | None | None | N |
F/M | 0.9523 | likely_pathogenic | 0.9591 | pathogenic | -0.068 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
F/N | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -2.306 | Highly Destabilizing | 0.998 | D | 0.889 | deleterious | None | None | None | None | N |
F/P | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -0.738 | Destabilizing | 0.998 | D | 0.901 | deleterious | None | None | None | None | N |
F/Q | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -1.908 | Destabilizing | 0.998 | D | 0.902 | deleterious | None | None | None | None | N |
F/R | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -1.909 | Destabilizing | 0.993 | D | 0.889 | deleterious | None | None | None | None | N |
F/S | 0.9985 | likely_pathogenic | 0.9986 | pathogenic | -2.505 | Highly Destabilizing | 0.991 | D | 0.86 | deleterious | D | 0.552569032 | None | None | N |
F/T | 0.998 | likely_pathogenic | 0.9982 | pathogenic | -2.142 | Highly Destabilizing | 0.993 | D | 0.864 | deleterious | None | None | None | None | N |
F/V | 0.9071 | likely_pathogenic | 0.918 | pathogenic | -0.738 | Destabilizing | 0.939 | D | 0.801 | deleterious | N | 0.489535492 | None | None | N |
F/W | 0.9337 | likely_pathogenic | 0.9418 | pathogenic | -0.191 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
F/Y | 0.7966 | likely_pathogenic | 0.8208 | pathogenic | -0.5 | Destabilizing | 0.046 | N | 0.24 | neutral | N | 0.511801392 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.