Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17445 | 52558;52559;52560 | chr2:178608678;178608677;178608676 | chr2:179473405;179473404;179473403 |
N2AB | 15804 | 47635;47636;47637 | chr2:178608678;178608677;178608676 | chr2:179473405;179473404;179473403 |
N2A | 14877 | 44854;44855;44856 | chr2:178608678;178608677;178608676 | chr2:179473405;179473404;179473403 |
N2B | 8380 | 25363;25364;25365 | chr2:178608678;178608677;178608676 | chr2:179473405;179473404;179473403 |
Novex-1 | 8505 | 25738;25739;25740 | chr2:178608678;178608677;178608676 | chr2:179473405;179473404;179473403 |
Novex-2 | 8572 | 25939;25940;25941 | chr2:178608678;178608677;178608676 | chr2:179473405;179473404;179473403 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1323206460 | -1.098 | 0.997 | N | 0.649 | 0.372 | 0.737662299136 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
V/I | rs1323206460 | -1.098 | 0.997 | N | 0.649 | 0.372 | 0.737662299136 | gnomAD-4.0.0 | 1.91776E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.52013E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8638 | likely_pathogenic | 0.8844 | pathogenic | -2.718 | Highly Destabilizing | 0.999 | D | 0.667 | neutral | D | 0.544250234 | None | None | N |
V/C | 0.952 | likely_pathogenic | 0.9562 | pathogenic | -2.156 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
V/D | 0.9983 | likely_pathogenic | 0.9987 | pathogenic | -3.469 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/E | 0.9944 | likely_pathogenic | 0.9958 | pathogenic | -3.17 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | D | 0.633894794 | None | None | N |
V/F | 0.9596 | likely_pathogenic | 0.9566 | pathogenic | -1.5 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/G | 0.9083 | likely_pathogenic | 0.9289 | pathogenic | -3.265 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.633894794 | None | None | N |
V/H | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -2.968 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/I | 0.1394 | likely_benign | 0.1293 | benign | -1.096 | Destabilizing | 0.997 | D | 0.649 | neutral | N | 0.518575668 | None | None | N |
V/K | 0.996 | likely_pathogenic | 0.9969 | pathogenic | -2.199 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/L | 0.7871 | likely_pathogenic | 0.7969 | pathogenic | -1.096 | Destabilizing | 0.997 | D | 0.69 | prob.neutral | N | 0.521102642 | None | None | N |
V/M | 0.8854 | likely_pathogenic | 0.8728 | pathogenic | -1.429 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
V/N | 0.9943 | likely_pathogenic | 0.9952 | pathogenic | -2.847 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/P | 0.9945 | likely_pathogenic | 0.996 | pathogenic | -1.625 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/Q | 0.9933 | likely_pathogenic | 0.9948 | pathogenic | -2.515 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
V/R | 0.9908 | likely_pathogenic | 0.9934 | pathogenic | -2.203 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/S | 0.9725 | likely_pathogenic | 0.9758 | pathogenic | -3.321 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/T | 0.9363 | likely_pathogenic | 0.9339 | pathogenic | -2.884 | Highly Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/W | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -1.973 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.9947 | likely_pathogenic | 0.9951 | pathogenic | -1.815 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.