Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17453 | 52582;52583;52584 | chr2:178608654;178608653;178608652 | chr2:179473381;179473380;179473379 |
N2AB | 15812 | 47659;47660;47661 | chr2:178608654;178608653;178608652 | chr2:179473381;179473380;179473379 |
N2A | 14885 | 44878;44879;44880 | chr2:178608654;178608653;178608652 | chr2:179473381;179473380;179473379 |
N2B | 8388 | 25387;25388;25389 | chr2:178608654;178608653;178608652 | chr2:179473381;179473380;179473379 |
Novex-1 | 8513 | 25762;25763;25764 | chr2:178608654;178608653;178608652 | chr2:179473381;179473380;179473379 |
Novex-2 | 8580 | 25963;25964;25965 | chr2:178608654;178608653;178608652 | chr2:179473381;179473380;179473379 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.521 | N | 0.515 | 0.084 | 0.215869574891 | gnomAD-4.0.0 | 1.59554E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03177E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0709 | likely_benign | 0.0711 | benign | -1.056 | Destabilizing | 0.003 | N | 0.321 | neutral | N | 0.448541501 | None | None | I |
P/C | 0.4017 | ambiguous | 0.3896 | ambiguous | -0.673 | Destabilizing | 0.02 | N | 0.517 | neutral | None | None | None | None | I |
P/D | 0.6679 | likely_pathogenic | 0.6754 | pathogenic | -1.096 | Destabilizing | 0.742 | D | 0.605 | neutral | None | None | None | None | I |
P/E | 0.4095 | ambiguous | 0.404 | ambiguous | -1.205 | Destabilizing | 0.742 | D | 0.581 | neutral | None | None | None | None | I |
P/F | 0.5232 | ambiguous | 0.507 | ambiguous | -1.203 | Destabilizing | 0.91 | D | 0.65 | neutral | None | None | None | None | I |
P/G | 0.3872 | ambiguous | 0.387 | ambiguous | -1.235 | Destabilizing | 0.59 | D | 0.576 | neutral | None | None | None | None | I |
P/H | 0.3228 | likely_benign | 0.311 | benign | -0.724 | Destabilizing | 0.02 | N | 0.485 | neutral | None | None | None | None | I |
P/I | 0.2341 | likely_benign | 0.2328 | benign | -0.709 | Destabilizing | 0.59 | D | 0.639 | neutral | None | None | None | None | I |
P/K | 0.4433 | ambiguous | 0.4299 | ambiguous | -0.754 | Destabilizing | 0.742 | D | 0.581 | neutral | None | None | None | None | I |
P/L | 0.1381 | likely_benign | 0.1354 | benign | -0.709 | Destabilizing | 0.007 | N | 0.496 | neutral | N | 0.4303211 | None | None | I |
P/M | 0.2929 | likely_benign | 0.279 | benign | -0.416 | Destabilizing | 0.91 | D | 0.643 | neutral | None | None | None | None | I |
P/N | 0.479 | ambiguous | 0.4815 | ambiguous | -0.425 | Destabilizing | 0.91 | D | 0.638 | neutral | None | None | None | None | I |
P/Q | 0.2427 | likely_benign | 0.2318 | benign | -0.784 | Destabilizing | 0.884 | D | 0.628 | neutral | N | 0.455006113 | None | None | I |
P/R | 0.322 | likely_benign | 0.3165 | benign | -0.103 | Destabilizing | 0.884 | D | 0.637 | neutral | N | 0.43397748 | None | None | I |
P/S | 0.1619 | likely_benign | 0.1591 | benign | -0.793 | Destabilizing | 0.521 | D | 0.515 | neutral | N | 0.465684467 | None | None | I |
P/T | 0.1197 | likely_benign | 0.1237 | benign | -0.815 | Destabilizing | 0.684 | D | 0.537 | neutral | N | 0.43695907 | None | None | I |
P/V | 0.1584 | likely_benign | 0.1569 | benign | -0.79 | Destabilizing | 0.59 | D | 0.579 | neutral | None | None | None | None | I |
P/W | 0.7415 | likely_pathogenic | 0.7282 | pathogenic | -1.231 | Destabilizing | 0.996 | D | 0.651 | neutral | None | None | None | None | I |
P/Y | 0.5467 | ambiguous | 0.5468 | ambiguous | -0.96 | Destabilizing | 0.835 | D | 0.655 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.