Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17454 | 52585;52586;52587 | chr2:178608651;178608650;178608649 | chr2:179473378;179473377;179473376 |
N2AB | 15813 | 47662;47663;47664 | chr2:178608651;178608650;178608649 | chr2:179473378;179473377;179473376 |
N2A | 14886 | 44881;44882;44883 | chr2:178608651;178608650;178608649 | chr2:179473378;179473377;179473376 |
N2B | 8389 | 25390;25391;25392 | chr2:178608651;178608650;178608649 | chr2:179473378;179473377;179473376 |
Novex-1 | 8514 | 25765;25766;25767 | chr2:178608651;178608650;178608649 | chr2:179473378;179473377;179473376 |
Novex-2 | 8581 | 25966;25967;25968 | chr2:178608651;178608650;178608649 | chr2:179473378;179473377;179473376 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 1.0 | D | 0.849 | 0.834 | 0.529561333529 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7492 | likely_pathogenic | 0.7601 | pathogenic | -0.944 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | D | 0.549791691 | None | None | I |
G/C | 0.9581 | likely_pathogenic | 0.9635 | pathogenic | -1.043 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.550805649 | None | None | I |
G/D | 0.9946 | likely_pathogenic | 0.996 | pathogenic | -1.87 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.55029867 | None | None | I |
G/E | 0.9954 | likely_pathogenic | 0.9962 | pathogenic | -1.919 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
G/F | 0.996 | likely_pathogenic | 0.9967 | pathogenic | -1.152 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
G/H | 0.9961 | likely_pathogenic | 0.9967 | pathogenic | -1.557 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/I | 0.9946 | likely_pathogenic | 0.9953 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
G/K | 0.9986 | likely_pathogenic | 0.9988 | pathogenic | -1.566 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
G/L | 0.9903 | likely_pathogenic | 0.9918 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
G/M | 0.9958 | likely_pathogenic | 0.9964 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
G/N | 0.9924 | likely_pathogenic | 0.9935 | pathogenic | -1.245 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
G/P | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
G/Q | 0.9947 | likely_pathogenic | 0.9955 | pathogenic | -1.456 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
G/R | 0.9956 | likely_pathogenic | 0.9962 | pathogenic | -1.18 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.537928406 | None | None | I |
G/S | 0.5327 | ambiguous | 0.552 | ambiguous | -1.429 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.476603255 | None | None | I |
G/T | 0.9601 | likely_pathogenic | 0.9664 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
G/V | 0.9882 | likely_pathogenic | 0.9901 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.55029867 | None | None | I |
G/W | 0.9956 | likely_pathogenic | 0.9964 | pathogenic | -1.526 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
G/Y | 0.9964 | likely_pathogenic | 0.997 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.