Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17456 | 52591;52592;52593 | chr2:178608645;178608644;178608643 | chr2:179473372;179473371;179473370 |
N2AB | 15815 | 47668;47669;47670 | chr2:178608645;178608644;178608643 | chr2:179473372;179473371;179473370 |
N2A | 14888 | 44887;44888;44889 | chr2:178608645;178608644;178608643 | chr2:179473372;179473371;179473370 |
N2B | 8391 | 25396;25397;25398 | chr2:178608645;178608644;178608643 | chr2:179473372;179473371;179473370 |
Novex-1 | 8516 | 25771;25772;25773 | chr2:178608645;178608644;178608643 | chr2:179473372;179473371;179473370 |
Novex-2 | 8583 | 25972;25973;25974 | chr2:178608645;178608644;178608643 | chr2:179473372;179473371;179473370 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/Q | None | None | 0.998 | D | 0.654 | 0.444 | 0.445910236696 | gnomAD-4.0.0 | 1.5959E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.79658E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0877 | likely_benign | 0.0897 | benign | -1.568 | Destabilizing | 0.543 | D | 0.449 | neutral | N | 0.487938876 | None | None | I |
P/C | 0.5888 | likely_pathogenic | 0.6098 | pathogenic | -0.847 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/D | 0.886 | likely_pathogenic | 0.9086 | pathogenic | -1.624 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | I |
P/E | 0.8048 | likely_pathogenic | 0.8328 | pathogenic | -1.64 | Destabilizing | 0.998 | D | 0.62 | neutral | None | None | None | None | I |
P/F | 0.6537 | likely_pathogenic | 0.7261 | pathogenic | -1.229 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
P/G | 0.4459 | ambiguous | 0.4713 | ambiguous | -1.861 | Destabilizing | 0.992 | D | 0.587 | neutral | None | None | None | None | I |
P/H | 0.5377 | ambiguous | 0.5727 | pathogenic | -1.438 | Destabilizing | 0.661 | D | 0.577 | neutral | None | None | None | None | I |
P/I | 0.6797 | likely_pathogenic | 0.7551 | pathogenic | -0.859 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
P/K | 0.9266 | likely_pathogenic | 0.9367 | pathogenic | -1.434 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | I |
P/L | 0.5244 | ambiguous | 0.5975 | pathogenic | -0.859 | Destabilizing | 0.997 | D | 0.679 | prob.neutral | N | 0.513538322 | None | None | I |
P/M | 0.7212 | likely_pathogenic | 0.7708 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
P/N | 0.8271 | likely_pathogenic | 0.8532 | pathogenic | -1.128 | Destabilizing | 0.998 | D | 0.675 | neutral | None | None | None | None | I |
P/Q | 0.6858 | likely_pathogenic | 0.7146 | pathogenic | -1.338 | Destabilizing | 0.998 | D | 0.654 | neutral | D | 0.533417004 | None | None | I |
P/R | 0.8504 | likely_pathogenic | 0.8601 | pathogenic | -0.821 | Destabilizing | 0.998 | D | 0.674 | neutral | N | 0.521389135 | None | None | I |
P/S | 0.2113 | likely_benign | 0.2195 | benign | -1.552 | Destabilizing | 0.978 | D | 0.567 | neutral | N | 0.50565151 | None | None | I |
P/T | 0.3703 | ambiguous | 0.412 | ambiguous | -1.478 | Destabilizing | 0.997 | D | 0.613 | neutral | D | 0.533163514 | None | None | I |
P/V | 0.4696 | ambiguous | 0.54 | ambiguous | -1.062 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | I |
P/W | 0.832 | likely_pathogenic | 0.8663 | pathogenic | -1.424 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
P/Y | 0.6739 | likely_pathogenic | 0.7411 | pathogenic | -1.18 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.