Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17461 | 52606;52607;52608 | chr2:178608630;178608629;178608628 | chr2:179473357;179473356;179473355 |
N2AB | 15820 | 47683;47684;47685 | chr2:178608630;178608629;178608628 | chr2:179473357;179473356;179473355 |
N2A | 14893 | 44902;44903;44904 | chr2:178608630;178608629;178608628 | chr2:179473357;179473356;179473355 |
N2B | 8396 | 25411;25412;25413 | chr2:178608630;178608629;178608628 | chr2:179473357;179473356;179473355 |
Novex-1 | 8521 | 25786;25787;25788 | chr2:178608630;178608629;178608628 | chr2:179473357;179473356;179473355 |
Novex-2 | 8588 | 25987;25988;25989 | chr2:178608630;178608629;178608628 | chr2:179473357;179473356;179473355 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs2055511936 | None | 0.995 | N | 0.805 | 0.283 | 0.258779203287 | gnomAD-4.0.0 | 1.59742E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86618E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0906 | likely_benign | 0.092 | benign | -1.068 | Destabilizing | 0.603 | D | 0.403 | neutral | N | 0.471454009 | None | None | N |
P/C | 0.5147 | ambiguous | 0.503 | ambiguous | -0.793 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
P/D | 0.5189 | ambiguous | 0.5146 | ambiguous | -0.793 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
P/E | 0.3486 | ambiguous | 0.3452 | ambiguous | -0.788 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
P/F | 0.5802 | likely_pathogenic | 0.5906 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/G | 0.3728 | ambiguous | 0.3642 | ambiguous | -1.353 | Destabilizing | 0.993 | D | 0.788 | deleterious | None | None | None | None | N |
P/H | 0.3276 | likely_benign | 0.3079 | benign | -0.693 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/I | 0.3301 | likely_benign | 0.331 | benign | -0.396 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
P/K | 0.4876 | ambiguous | 0.4611 | ambiguous | -0.938 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
P/L | 0.1695 | likely_benign | 0.1658 | benign | -0.396 | Destabilizing | 0.997 | D | 0.755 | deleterious | N | 0.49391313 | None | None | N |
P/M | 0.3686 | ambiguous | 0.3678 | ambiguous | -0.468 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
P/N | 0.4017 | ambiguous | 0.3987 | ambiguous | -0.814 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
P/Q | 0.2907 | likely_benign | 0.275 | benign | -0.935 | Destabilizing | 1.0 | D | 0.852 | deleterious | N | 0.488597212 | None | None | N |
P/R | 0.3678 | ambiguous | 0.34 | benign | -0.441 | Destabilizing | 0.999 | D | 0.857 | deleterious | N | 0.474607561 | None | None | N |
P/S | 0.1658 | likely_benign | 0.1654 | benign | -1.3 | Destabilizing | 0.995 | D | 0.805 | deleterious | N | 0.521825751 | None | None | N |
P/T | 0.1509 | likely_benign | 0.1478 | benign | -1.179 | Destabilizing | 0.997 | D | 0.767 | deleterious | N | 0.46897202 | None | None | N |
P/V | 0.2124 | likely_benign | 0.2141 | benign | -0.586 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | N |
P/W | 0.7504 | likely_pathogenic | 0.7458 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
P/Y | 0.536 | ambiguous | 0.5336 | ambiguous | -0.611 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.