Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17463 | 52612;52613;52614 | chr2:178608624;178608623;178608622 | chr2:179473351;179473350;179473349 |
N2AB | 15822 | 47689;47690;47691 | chr2:178608624;178608623;178608622 | chr2:179473351;179473350;179473349 |
N2A | 14895 | 44908;44909;44910 | chr2:178608624;178608623;178608622 | chr2:179473351;179473350;179473349 |
N2B | 8398 | 25417;25418;25419 | chr2:178608624;178608623;178608622 | chr2:179473351;179473350;179473349 |
Novex-1 | 8523 | 25792;25793;25794 | chr2:178608624;178608623;178608622 | chr2:179473351;179473350;179473349 |
Novex-2 | 8590 | 25993;25994;25995 | chr2:178608624;178608623;178608622 | chr2:179473351;179473350;179473349 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2055509870 | None | 0.002 | N | 0.217 | 0.066 | 0.180583059064 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs2055509870 | None | 0.002 | N | 0.217 | 0.066 | 0.180583059064 | gnomAD-4.0.0 | 6.57713E-06 | None | None | None | None | N | None | 2.41289E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | None | None | 0.001 | N | 0.223 | 0.112 | 0.0806252709748 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1438 | likely_benign | 0.1294 | benign | -0.892 | Destabilizing | 0.002 | N | 0.217 | neutral | N | 0.515494425 | None | None | N |
V/C | 0.5725 | likely_pathogenic | 0.5594 | ambiguous | -0.797 | Destabilizing | 0.204 | N | 0.299 | neutral | None | None | None | None | N |
V/D | 0.3289 | likely_benign | 0.3073 | benign | -0.43 | Destabilizing | 0.018 | N | 0.538 | neutral | None | None | None | None | N |
V/E | 0.1832 | likely_benign | 0.1789 | benign | -0.473 | Destabilizing | None | N | 0.464 | neutral | N | 0.496465947 | None | None | N |
V/F | 0.1552 | likely_benign | 0.1482 | benign | -0.711 | Destabilizing | 0.018 | N | 0.513 | neutral | None | None | None | None | N |
V/G | 0.2906 | likely_benign | 0.24 | benign | -1.139 | Destabilizing | 0.013 | N | 0.478 | neutral | N | 0.516534575 | None | None | N |
V/H | 0.3775 | ambiguous | 0.3745 | ambiguous | -0.566 | Destabilizing | 0.204 | N | 0.399 | neutral | None | None | None | None | N |
V/I | 0.0673 | likely_benign | 0.0656 | benign | -0.35 | Destabilizing | None | N | 0.049 | neutral | None | None | None | None | N |
V/K | 0.2007 | likely_benign | 0.1977 | benign | -0.769 | Destabilizing | 0.018 | N | 0.419 | neutral | None | None | None | None | N |
V/L | 0.1034 | likely_benign | 0.1043 | benign | -0.35 | Destabilizing | None | N | 0.055 | neutral | N | 0.462622732 | None | None | N |
V/M | 0.1146 | likely_benign | 0.1062 | benign | -0.412 | Destabilizing | 0.001 | N | 0.223 | neutral | N | 0.516534575 | None | None | N |
V/N | 0.2401 | likely_benign | 0.225 | benign | -0.562 | Destabilizing | 0.035 | N | 0.581 | neutral | None | None | None | None | N |
V/P | 0.3564 | ambiguous | 0.3567 | ambiguous | -0.494 | Destabilizing | 0.068 | N | 0.543 | neutral | None | None | None | None | N |
V/Q | 0.1992 | likely_benign | 0.1966 | benign | -0.729 | Destabilizing | 0.018 | N | 0.571 | neutral | None | None | None | None | N |
V/R | 0.1876 | likely_benign | 0.1861 | benign | -0.263 | Destabilizing | 0.035 | N | 0.555 | neutral | None | None | None | None | N |
V/S | 0.1892 | likely_benign | 0.1695 | benign | -1.06 | Destabilizing | None | N | 0.423 | neutral | None | None | None | None | N |
V/T | 0.0995 | likely_benign | 0.0905 | benign | -0.986 | Destabilizing | None | N | 0.095 | neutral | None | None | None | None | N |
V/W | 0.6446 | likely_pathogenic | 0.6339 | pathogenic | -0.828 | Destabilizing | 0.747 | D | 0.433 | neutral | None | None | None | None | N |
V/Y | 0.4066 | ambiguous | 0.3998 | ambiguous | -0.537 | Destabilizing | 0.204 | N | 0.505 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.