Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17466 | 52621;52622;52623 | chr2:178608615;178608614;178608613 | chr2:179473342;179473341;179473340 |
N2AB | 15825 | 47698;47699;47700 | chr2:178608615;178608614;178608613 | chr2:179473342;179473341;179473340 |
N2A | 14898 | 44917;44918;44919 | chr2:178608615;178608614;178608613 | chr2:179473342;179473341;179473340 |
N2B | 8401 | 25426;25427;25428 | chr2:178608615;178608614;178608613 | chr2:179473342;179473341;179473340 |
Novex-1 | 8526 | 25801;25802;25803 | chr2:178608615;178608614;178608613 | chr2:179473342;179473341;179473340 |
Novex-2 | 8593 | 26002;26003;26004 | chr2:178608615;178608614;178608613 | chr2:179473342;179473341;179473340 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs377156953 | None | 0.919 | N | 0.608 | 0.235 | 0.235664433957 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8201 | likely_pathogenic | 0.7404 | pathogenic | -0.403 | Destabilizing | 0.958 | D | 0.556 | neutral | N | 0.494964437 | None | None | N |
D/C | 0.9567 | likely_pathogenic | 0.9375 | pathogenic | -0.244 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
D/E | 0.7414 | likely_pathogenic | 0.6684 | pathogenic | -0.512 | Destabilizing | 0.824 | D | 0.531 | neutral | N | 0.466759115 | None | None | N |
D/F | 0.9106 | likely_pathogenic | 0.8748 | pathogenic | -0.217 | Destabilizing | 0.997 | D | 0.729 | deleterious | None | None | None | None | N |
D/G | 0.8937 | likely_pathogenic | 0.8375 | pathogenic | -0.644 | Destabilizing | 0.919 | D | 0.608 | neutral | N | 0.511915402 | None | None | N |
D/H | 0.789 | likely_pathogenic | 0.7243 | pathogenic | -0.198 | Destabilizing | 0.988 | D | 0.492 | neutral | N | 0.4981781 | None | None | N |
D/I | 0.9032 | likely_pathogenic | 0.8462 | pathogenic | 0.199 | Stabilizing | 0.997 | D | 0.784 | deleterious | None | None | None | None | N |
D/K | 0.9706 | likely_pathogenic | 0.9491 | pathogenic | -0.168 | Destabilizing | 0.938 | D | 0.648 | neutral | None | None | None | None | N |
D/L | 0.8598 | likely_pathogenic | 0.7893 | pathogenic | 0.199 | Stabilizing | 0.991 | D | 0.759 | deleterious | None | None | None | None | N |
D/M | 0.9589 | likely_pathogenic | 0.9354 | pathogenic | 0.316 | Stabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
D/N | 0.3089 | likely_benign | 0.2606 | benign | -0.452 | Destabilizing | 0.06 | N | 0.198 | neutral | N | 0.412695344 | None | None | N |
D/P | 0.9591 | likely_pathogenic | 0.9249 | pathogenic | 0.021 | Stabilizing | 0.997 | D | 0.553 | neutral | None | None | None | None | N |
D/Q | 0.951 | likely_pathogenic | 0.9214 | pathogenic | -0.395 | Destabilizing | 0.991 | D | 0.54 | neutral | None | None | None | None | N |
D/R | 0.9766 | likely_pathogenic | 0.96 | pathogenic | 0.085 | Stabilizing | 0.991 | D | 0.693 | prob.delet. | None | None | None | None | N |
D/S | 0.662 | likely_pathogenic | 0.5924 | pathogenic | -0.591 | Destabilizing | 0.938 | D | 0.545 | neutral | None | None | None | None | N |
D/T | 0.8822 | likely_pathogenic | 0.8225 | pathogenic | -0.411 | Destabilizing | 0.938 | D | 0.649 | prob.neutral | None | None | None | None | N |
D/V | 0.8193 | likely_pathogenic | 0.7321 | pathogenic | 0.021 | Stabilizing | 0.996 | D | 0.78 | deleterious | N | 0.497311309 | None | None | N |
D/W | 0.981 | likely_pathogenic | 0.9743 | pathogenic | -0.075 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
D/Y | 0.5291 | ambiguous | 0.4598 | ambiguous | -0.004 | Destabilizing | 0.996 | D | 0.745 | deleterious | N | 0.483902081 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.