Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17473 | 52642;52643;52644 | chr2:178608466;178608465;178608464 | chr2:179473193;179473192;179473191 |
N2AB | 15832 | 47719;47720;47721 | chr2:178608466;178608465;178608464 | chr2:179473193;179473192;179473191 |
N2A | 14905 | 44938;44939;44940 | chr2:178608466;178608465;178608464 | chr2:179473193;179473192;179473191 |
N2B | 8408 | 25447;25448;25449 | chr2:178608466;178608465;178608464 | chr2:179473193;179473192;179473191 |
Novex-1 | 8533 | 25822;25823;25824 | chr2:178608466;178608465;178608464 | chr2:179473193;179473192;179473191 |
Novex-2 | 8600 | 26023;26024;26025 | chr2:178608466;178608465;178608464 | chr2:179473193;179473192;179473191 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1408028554 | -0.736 | 0.989 | N | 0.717 | 0.32 | 0.400613892164 | gnomAD-4.0.0 | 2.08187E-06 | None | None | None | None | N | None | 0 | 2.45242E-05 | None | 0 | 0 | None | 0 | 0 | 1.81357E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.527 | ambiguous | 0.5359 | ambiguous | -0.869 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
A/D | 0.6892 | likely_pathogenic | 0.7067 | pathogenic | -1.707 | Destabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | N |
A/E | 0.3849 | ambiguous | 0.4054 | ambiguous | -1.818 | Destabilizing | 0.993 | D | 0.819 | deleterious | N | 0.504457558 | None | None | N |
A/F | 0.574 | likely_pathogenic | 0.5909 | pathogenic | -1.347 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
A/G | 0.2502 | likely_benign | 0.2538 | benign | -1.04 | Destabilizing | 0.977 | D | 0.662 | neutral | N | 0.51281535 | None | None | N |
A/H | 0.662 | likely_pathogenic | 0.6836 | pathogenic | -1.11 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
A/I | 0.5096 | ambiguous | 0.494 | ambiguous | -0.647 | Destabilizing | 0.998 | D | 0.834 | deleterious | None | None | None | None | N |
A/K | 0.6686 | likely_pathogenic | 0.6825 | pathogenic | -1.144 | Destabilizing | 0.995 | D | 0.817 | deleterious | None | None | None | None | N |
A/L | 0.4618 | ambiguous | 0.464 | ambiguous | -0.647 | Destabilizing | 0.983 | D | 0.803 | deleterious | None | None | None | None | N |
A/M | 0.444 | ambiguous | 0.4357 | ambiguous | -0.352 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
A/N | 0.5785 | likely_pathogenic | 0.5842 | pathogenic | -0.824 | Destabilizing | 0.998 | D | 0.88 | deleterious | None | None | None | None | N |
A/P | 0.1736 | likely_benign | 0.1546 | benign | -0.692 | Destabilizing | 0.117 | N | 0.438 | neutral | N | 0.447314924 | None | None | N |
A/Q | 0.4358 | ambiguous | 0.4497 | ambiguous | -1.171 | Destabilizing | 0.998 | D | 0.845 | deleterious | None | None | None | None | N |
A/R | 0.582 | likely_pathogenic | 0.6159 | pathogenic | -0.61 | Destabilizing | 0.998 | D | 0.842 | deleterious | None | None | None | None | N |
A/S | 0.1273 | likely_benign | 0.1331 | benign | -1.0 | Destabilizing | 0.977 | D | 0.69 | prob.neutral | N | 0.509462248 | None | None | N |
A/T | 0.2295 | likely_benign | 0.2202 | benign | -1.05 | Destabilizing | 0.989 | D | 0.761 | deleterious | N | 0.486063815 | None | None | N |
A/V | 0.302 | likely_benign | 0.2892 | benign | -0.692 | Destabilizing | 0.989 | D | 0.717 | prob.delet. | N | 0.511849192 | None | None | N |
A/W | 0.913 | likely_pathogenic | 0.9166 | pathogenic | -1.543 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
A/Y | 0.6765 | likely_pathogenic | 0.6912 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.