Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17482 | 52669;52670;52671 | chr2:178608439;178608438;178608437 | chr2:179473166;179473165;179473164 |
N2AB | 15841 | 47746;47747;47748 | chr2:178608439;178608438;178608437 | chr2:179473166;179473165;179473164 |
N2A | 14914 | 44965;44966;44967 | chr2:178608439;178608438;178608437 | chr2:179473166;179473165;179473164 |
N2B | 8417 | 25474;25475;25476 | chr2:178608439;178608438;178608437 | chr2:179473166;179473165;179473164 |
Novex-1 | 8542 | 25849;25850;25851 | chr2:178608439;178608438;178608437 | chr2:179473166;179473165;179473164 |
Novex-2 | 8609 | 26050;26051;26052 | chr2:178608439;178608438;178608437 | chr2:179473166;179473165;179473164 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs765605129 | -1.27 | 0.896 | N | 0.455 | 0.23 | 0.536381233585 | gnomAD-2.1.1 | 4.2E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.32E-06 | 0 |
V/A | rs765605129 | -1.27 | 0.896 | N | 0.455 | 0.23 | 0.536381233585 | gnomAD-4.0.0 | 6.87298E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66406E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3024 | likely_benign | 0.2664 | benign | -1.413 | Destabilizing | 0.896 | D | 0.455 | neutral | N | 0.509536819 | None | None | N |
V/C | 0.759 | likely_pathogenic | 0.7288 | pathogenic | -1.127 | Destabilizing | 0.999 | D | 0.533 | neutral | None | None | None | None | N |
V/D | 0.7051 | likely_pathogenic | 0.6955 | pathogenic | -2.555 | Highly Destabilizing | 0.984 | D | 0.673 | neutral | N | 0.510076191 | None | None | N |
V/E | 0.5888 | likely_pathogenic | 0.568 | pathogenic | -2.558 | Highly Destabilizing | 0.976 | D | 0.597 | neutral | None | None | None | None | N |
V/F | 0.3948 | ambiguous | 0.374 | ambiguous | -1.322 | Destabilizing | 0.968 | D | 0.541 | neutral | N | 0.487314355 | None | None | N |
V/G | 0.444 | ambiguous | 0.3996 | ambiguous | -1.715 | Destabilizing | 0.968 | D | 0.621 | neutral | N | 0.502696358 | None | None | N |
V/H | 0.8752 | likely_pathogenic | 0.8586 | pathogenic | -1.491 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
V/I | 0.076 | likely_benign | 0.0751 | benign | -0.659 | Destabilizing | 0.026 | N | 0.175 | neutral | N | 0.457278414 | None | None | N |
V/K | 0.7001 | likely_pathogenic | 0.6783 | pathogenic | -1.239 | Destabilizing | 0.976 | D | 0.598 | neutral | None | None | None | None | N |
V/L | 0.4363 | ambiguous | 0.4513 | ambiguous | -0.659 | Destabilizing | 0.64 | D | 0.395 | neutral | N | 0.470447413 | None | None | N |
V/M | 0.2676 | likely_benign | 0.2526 | benign | -0.396 | Destabilizing | 0.976 | D | 0.467 | neutral | None | None | None | None | N |
V/N | 0.5683 | likely_pathogenic | 0.5417 | ambiguous | -1.226 | Destabilizing | 0.988 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/P | 0.6662 | likely_pathogenic | 0.6723 | pathogenic | -0.88 | Destabilizing | 0.076 | N | 0.328 | neutral | None | None | None | None | N |
V/Q | 0.6651 | likely_pathogenic | 0.6313 | pathogenic | -1.436 | Destabilizing | 0.988 | D | 0.624 | neutral | None | None | None | None | N |
V/R | 0.6382 | likely_pathogenic | 0.6332 | pathogenic | -0.77 | Destabilizing | 0.988 | D | 0.688 | prob.neutral | None | None | None | None | N |
V/S | 0.3961 | ambiguous | 0.3533 | ambiguous | -1.54 | Destabilizing | 0.976 | D | 0.52 | neutral | None | None | None | None | N |
V/T | 0.2876 | likely_benign | 0.2478 | benign | -1.451 | Destabilizing | 0.919 | D | 0.443 | neutral | None | None | None | None | N |
V/W | 0.9471 | likely_pathogenic | 0.9444 | pathogenic | -1.674 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/Y | 0.7879 | likely_pathogenic | 0.7796 | pathogenic | -1.33 | Destabilizing | 0.988 | D | 0.543 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.