Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17483 | 52672;52673;52674 | chr2:178608436;178608435;178608434 | chr2:179473163;179473162;179473161 |
N2AB | 15842 | 47749;47750;47751 | chr2:178608436;178608435;178608434 | chr2:179473163;179473162;179473161 |
N2A | 14915 | 44968;44969;44970 | chr2:178608436;178608435;178608434 | chr2:179473163;179473162;179473161 |
N2B | 8418 | 25477;25478;25479 | chr2:178608436;178608435;178608434 | chr2:179473163;179473162;179473161 |
Novex-1 | 8543 | 25852;25853;25854 | chr2:178608436;178608435;178608434 | chr2:179473163;179473162;179473161 |
Novex-2 | 8610 | 26053;26054;26055 | chr2:178608436;178608435;178608434 | chr2:179473163;179473162;179473161 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.76 | N | 0.491 | 0.318 | 0.191931220699 | gnomAD-4.0.0 | 1.60622E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.42365E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2177 | likely_benign | 0.1773 | benign | -0.528 | Destabilizing | 0.76 | D | 0.491 | neutral | N | 0.471501051 | None | None | N |
T/C | 0.6252 | likely_pathogenic | 0.4567 | ambiguous | -0.526 | Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | N |
T/D | 0.5503 | ambiguous | 0.5033 | ambiguous | -1.56 | Destabilizing | 0.986 | D | 0.475 | neutral | None | None | None | None | N |
T/E | 0.6449 | likely_pathogenic | 0.618 | pathogenic | -1.535 | Destabilizing | 0.986 | D | 0.469 | neutral | None | None | None | None | N |
T/F | 0.5772 | likely_pathogenic | 0.4924 | ambiguous | -0.816 | Destabilizing | 0.986 | D | 0.581 | neutral | None | None | None | None | N |
T/G | 0.3202 | likely_benign | 0.2485 | benign | -0.787 | Destabilizing | 0.91 | D | 0.493 | neutral | None | None | None | None | N |
T/H | 0.4103 | ambiguous | 0.3565 | ambiguous | -1.296 | Destabilizing | 0.999 | D | 0.566 | neutral | None | None | None | None | N |
T/I | 0.698 | likely_pathogenic | 0.6537 | pathogenic | 0.074 | Stabilizing | 0.964 | D | 0.475 | neutral | N | 0.505356158 | None | None | N |
T/K | 0.28 | likely_benign | 0.3067 | benign | -0.766 | Destabilizing | 0.986 | D | 0.479 | neutral | None | None | None | None | N |
T/L | 0.3036 | likely_benign | 0.2454 | benign | 0.074 | Stabilizing | 0.91 | D | 0.429 | neutral | None | None | None | None | N |
T/M | 0.2477 | likely_benign | 0.1998 | benign | 0.537 | Stabilizing | 0.807 | D | 0.373 | neutral | None | None | None | None | N |
T/N | 0.1719 | likely_benign | 0.1506 | benign | -1.095 | Destabilizing | 0.982 | D | 0.519 | neutral | N | 0.50534172 | None | None | N |
T/P | 0.8284 | likely_pathogenic | 0.8185 | pathogenic | -0.095 | Destabilizing | 0.991 | D | 0.523 | neutral | N | 0.501735307 | None | None | N |
T/Q | 0.3546 | ambiguous | 0.3414 | ambiguous | -1.297 | Destabilizing | 0.993 | D | 0.527 | neutral | None | None | None | None | N |
T/R | 0.2508 | likely_benign | 0.2593 | benign | -0.532 | Destabilizing | 0.986 | D | 0.519 | neutral | None | None | None | None | N |
T/S | 0.1307 | likely_benign | 0.1059 | benign | -1.097 | Destabilizing | 0.17 | N | 0.303 | neutral | N | 0.461377512 | None | None | N |
T/V | 0.5107 | ambiguous | 0.4582 | ambiguous | -0.095 | Destabilizing | 0.91 | D | 0.455 | neutral | None | None | None | None | N |
T/W | 0.8833 | likely_pathogenic | 0.8202 | pathogenic | -0.93 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
T/Y | 0.5936 | likely_pathogenic | 0.4794 | ambiguous | -0.565 | Destabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.