Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17492 | 52699;52700;52701 | chr2:178608409;178608408;178608407 | chr2:179473136;179473135;179473134 |
N2AB | 15851 | 47776;47777;47778 | chr2:178608409;178608408;178608407 | chr2:179473136;179473135;179473134 |
N2A | 14924 | 44995;44996;44997 | chr2:178608409;178608408;178608407 | chr2:179473136;179473135;179473134 |
N2B | 8427 | 25504;25505;25506 | chr2:178608409;178608408;178608407 | chr2:179473136;179473135;179473134 |
Novex-1 | 8552 | 25879;25880;25881 | chr2:178608409;178608408;178608407 | chr2:179473136;179473135;179473134 |
Novex-2 | 8619 | 26080;26081;26082 | chr2:178608409;178608408;178608407 | chr2:179473136;179473135;179473134 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.896 | N | 0.521 | 0.205 | 0.187945064343 | gnomAD-4.0.0 | 1.60022E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44421E-05 | 0 |
N/K | rs769123120 | -0.095 | 0.026 | N | 0.217 | 0.127 | 0.0954503805726 | gnomAD-2.1.1 | 1.24E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.00496E-04 | None | 0 | 0 | 0 |
N/K | rs769123120 | -0.095 | 0.026 | N | 0.217 | 0.127 | 0.0954503805726 | gnomAD-4.0.0 | 3.42926E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00831E-07 | 3.50034E-05 | 1.66041E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1708 | likely_benign | 0.1727 | benign | -0.575 | Destabilizing | 0.919 | D | 0.628 | neutral | None | None | None | None | N |
N/C | 0.2431 | likely_benign | 0.2479 | benign | 0.085 | Stabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
N/D | 0.1467 | likely_benign | 0.1447 | benign | -0.208 | Destabilizing | 0.896 | D | 0.521 | neutral | N | 0.430206456 | None | None | N |
N/E | 0.191 | likely_benign | 0.2081 | benign | -0.151 | Destabilizing | 0.851 | D | 0.446 | neutral | None | None | None | None | N |
N/F | 0.4643 | ambiguous | 0.4783 | ambiguous | -0.579 | Destabilizing | 0.976 | D | 0.777 | deleterious | None | None | None | None | N |
N/G | 0.2731 | likely_benign | 0.2715 | benign | -0.853 | Destabilizing | 0.919 | D | 0.463 | neutral | None | None | None | None | N |
N/H | 0.1013 | likely_benign | 0.1039 | benign | -0.727 | Destabilizing | 0.995 | D | 0.589 | neutral | N | 0.442541035 | None | None | N |
N/I | 0.1773 | likely_benign | 0.1774 | benign | 0.104 | Stabilizing | 0.938 | D | 0.731 | prob.delet. | N | 0.459337285 | None | None | N |
N/K | 0.1501 | likely_benign | 0.1564 | benign | -0.244 | Destabilizing | 0.026 | N | 0.217 | neutral | N | 0.386876967 | None | None | N |
N/L | 0.1893 | likely_benign | 0.1926 | benign | 0.104 | Stabilizing | 0.034 | N | 0.483 | neutral | None | None | None | None | N |
N/M | 0.2255 | likely_benign | 0.229 | benign | 0.234 | Stabilizing | 0.993 | D | 0.772 | deleterious | None | None | None | None | N |
N/P | 0.7248 | likely_pathogenic | 0.7099 | pathogenic | -0.094 | Destabilizing | 0.988 | D | 0.775 | deleterious | None | None | None | None | N |
N/Q | 0.1918 | likely_benign | 0.2077 | benign | -0.606 | Destabilizing | 0.976 | D | 0.573 | neutral | None | None | None | None | N |
N/R | 0.1894 | likely_benign | 0.1996 | benign | -0.295 | Destabilizing | 0.851 | D | 0.519 | neutral | None | None | None | None | N |
N/S | 0.0963 | likely_benign | 0.0956 | benign | -0.592 | Destabilizing | 0.896 | D | 0.479 | neutral | N | 0.414735572 | None | None | N |
N/T | 0.1095 | likely_benign | 0.1081 | benign | -0.364 | Destabilizing | 0.896 | D | 0.505 | neutral | N | 0.393168221 | None | None | N |
N/V | 0.1762 | likely_benign | 0.1788 | benign | -0.094 | Destabilizing | 0.851 | D | 0.691 | prob.neutral | None | None | None | None | N |
N/W | 0.6505 | likely_pathogenic | 0.6733 | pathogenic | -0.505 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
N/Y | 0.1567 | likely_benign | 0.165 | benign | -0.265 | Destabilizing | 0.995 | D | 0.775 | deleterious | N | 0.451333877 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.