Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17497 | 52714;52715;52716 | chr2:178608394;178608393;178608392 | chr2:179473121;179473120;179473119 |
N2AB | 15856 | 47791;47792;47793 | chr2:178608394;178608393;178608392 | chr2:179473121;179473120;179473119 |
N2A | 14929 | 45010;45011;45012 | chr2:178608394;178608393;178608392 | chr2:179473121;179473120;179473119 |
N2B | 8432 | 25519;25520;25521 | chr2:178608394;178608393;178608392 | chr2:179473121;179473120;179473119 |
Novex-1 | 8557 | 25894;25895;25896 | chr2:178608394;178608393;178608392 | chr2:179473121;179473120;179473119 |
Novex-2 | 8624 | 26095;26096;26097 | chr2:178608394;178608393;178608392 | chr2:179473121;179473120;179473119 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.999 | N | 0.721 | 0.452 | 0.264081493735 | gnomAD-4.0.0 | 6.85611E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00589E-07 | 0 | 0 |
N/S | None | None | 0.999 | D | 0.663 | 0.318 | 0.209622950755 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.503 | ambiguous | 0.4919 | ambiguous | -0.426 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
N/C | 0.4848 | ambiguous | 0.4612 | ambiguous | 0.434 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
N/D | 0.1694 | likely_benign | 0.1733 | benign | -0.135 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | N | 0.505069574 | None | None | I |
N/E | 0.6857 | likely_pathogenic | 0.6881 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | I |
N/F | 0.8182 | likely_pathogenic | 0.8245 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
N/G | 0.2923 | likely_benign | 0.2838 | benign | -0.635 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | I |
N/H | 0.2293 | likely_benign | 0.2303 | benign | -0.707 | Destabilizing | 1.0 | D | 0.842 | deleterious | N | 0.474091036 | None | None | I |
N/I | 0.7939 | likely_pathogenic | 0.8455 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.869 | deleterious | N | 0.509881472 | None | None | I |
N/K | 0.6465 | likely_pathogenic | 0.6769 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.835 | deleterious | N | 0.476684702 | None | None | I |
N/L | 0.6208 | likely_pathogenic | 0.6344 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
N/M | 0.717 | likely_pathogenic | 0.7328 | pathogenic | 0.575 | Stabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
N/P | 0.9646 | likely_pathogenic | 0.9787 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | I |
N/Q | 0.6245 | likely_pathogenic | 0.6207 | pathogenic | -0.439 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
N/R | 0.6062 | likely_pathogenic | 0.6462 | pathogenic | 0.116 | Stabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
N/S | 0.1283 | likely_benign | 0.1274 | benign | -0.192 | Destabilizing | 0.999 | D | 0.663 | neutral | D | 0.523481977 | None | None | I |
N/T | 0.4097 | ambiguous | 0.5263 | ambiguous | -0.06 | Destabilizing | 0.999 | D | 0.824 | deleterious | N | 0.467240955 | None | None | I |
N/V | 0.7482 | likely_pathogenic | 0.803 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
N/W | 0.9322 | likely_pathogenic | 0.9342 | pathogenic | -0.638 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
N/Y | 0.4003 | ambiguous | 0.4078 | ambiguous | -0.387 | Destabilizing | 1.0 | D | 0.868 | deleterious | N | 0.510134962 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.