Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17504 | 52735;52736;52737 | chr2:178608373;178608372;178608371 | chr2:179473100;179473099;179473098 |
N2AB | 15863 | 47812;47813;47814 | chr2:178608373;178608372;178608371 | chr2:179473100;179473099;179473098 |
N2A | 14936 | 45031;45032;45033 | chr2:178608373;178608372;178608371 | chr2:179473100;179473099;179473098 |
N2B | 8439 | 25540;25541;25542 | chr2:178608373;178608372;178608371 | chr2:179473100;179473099;179473098 |
Novex-1 | 8564 | 25915;25916;25917 | chr2:178608373;178608372;178608371 | chr2:179473100;179473099;179473098 |
Novex-2 | 8631 | 26116;26117;26118 | chr2:178608373;178608372;178608371 | chr2:179473100;179473099;179473098 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1343011962 | -1.812 | 1.0 | D | 0.906 | 0.907 | 0.851035771418 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.3E-05 | None | 0 | 0 | 0 |
Y/C | rs1343011962 | -1.812 | 1.0 | D | 0.906 | 0.907 | 0.851035771418 | gnomAD-4.0.0 | 1.59562E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4374E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.998 | likely_pathogenic | 0.998 | pathogenic | -3.255 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Y/C | 0.932 | likely_pathogenic | 0.9369 | pathogenic | -1.629 | Destabilizing | 1.0 | D | 0.906 | deleterious | D | 0.657227317 | None | None | N |
Y/D | 0.9979 | likely_pathogenic | 0.9976 | pathogenic | -3.69 | Highly Destabilizing | 1.0 | D | 0.93 | deleterious | D | 0.657429121 | None | None | N |
Y/E | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -3.471 | Highly Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | N |
Y/F | 0.2352 | likely_benign | 0.2552 | benign | -1.388 | Destabilizing | 0.999 | D | 0.645 | neutral | D | 0.571378193 | None | None | N |
Y/G | 0.9927 | likely_pathogenic | 0.9932 | pathogenic | -3.652 | Highly Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | None | None | N |
Y/H | 0.9832 | likely_pathogenic | 0.9828 | pathogenic | -2.548 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.656823708 | None | None | N |
Y/I | 0.9767 | likely_pathogenic | 0.9734 | pathogenic | -1.902 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/K | 0.9986 | likely_pathogenic | 0.9982 | pathogenic | -2.339 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
Y/L | 0.9637 | likely_pathogenic | 0.961 | pathogenic | -1.902 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
Y/M | 0.989 | likely_pathogenic | 0.9893 | pathogenic | -1.583 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
Y/N | 0.9835 | likely_pathogenic | 0.9818 | pathogenic | -3.173 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | D | 0.657227317 | None | None | N |
Y/P | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -2.373 | Highly Destabilizing | 1.0 | D | 0.947 | deleterious | None | None | None | None | N |
Y/Q | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -2.877 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/R | 0.9952 | likely_pathogenic | 0.9943 | pathogenic | -2.249 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | N |
Y/S | 0.9913 | likely_pathogenic | 0.9912 | pathogenic | -3.422 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | D | 0.657227317 | None | None | N |
Y/T | 0.9969 | likely_pathogenic | 0.9969 | pathogenic | -3.084 | Highly Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | N |
Y/V | 0.9634 | likely_pathogenic | 0.9606 | pathogenic | -2.373 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Y/W | 0.8519 | likely_pathogenic | 0.8557 | pathogenic | -0.659 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.