Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17512 | 52759;52760;52761 | chr2:178608349;178608348;178608347 | chr2:179473076;179473075;179473074 |
N2AB | 15871 | 47836;47837;47838 | chr2:178608349;178608348;178608347 | chr2:179473076;179473075;179473074 |
N2A | 14944 | 45055;45056;45057 | chr2:178608349;178608348;178608347 | chr2:179473076;179473075;179473074 |
N2B | 8447 | 25564;25565;25566 | chr2:178608349;178608348;178608347 | chr2:179473076;179473075;179473074 |
Novex-1 | 8572 | 25939;25940;25941 | chr2:178608349;178608348;178608347 | chr2:179473076;179473075;179473074 |
Novex-2 | 8639 | 26140;26141;26142 | chr2:178608349;178608348;178608347 | chr2:179473076;179473075;179473074 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs528550177 | 0.39 | 0.896 | N | 0.43 | 0.323 | 0.244539031024 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/D | rs528550177 | 0.39 | 0.896 | N | 0.43 | 0.323 | 0.244539031024 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
N/D | rs528550177 | 0.39 | 0.896 | N | 0.43 | 0.323 | 0.244539031024 | gnomAD-4.0.0 | 3.85025E-06 | None | None | None | None | N | None | 0 | 1.69774E-05 | None | 0 | 0 | None | 0 | 0 | 2.39676E-06 | 0 | 2.84933E-05 |
N/I | rs1446942544 | 0.242 | 0.984 | N | 0.586 | 0.535 | 0.546780063783 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
N/I | rs1446942544 | 0.242 | 0.984 | N | 0.586 | 0.535 | 0.546780063783 | gnomAD-4.0.0 | 1.5946E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43505E-05 | 0 |
N/K | rs199615557 | 0.483 | 0.026 | N | 0.278 | 0.1 | 0.0666544352282 | gnomAD-2.1.1 | 3.23732E-04 | None | None | None | None | N | None | 8.3E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.93186E-04 | 0 |
N/K | rs199615557 | 0.483 | 0.026 | N | 0.278 | 0.1 | 0.0666544352282 | gnomAD-3.1.2 | 3.48905E-04 | None | None | None | None | N | None | 1.93283E-04 | 1.31251E-04 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 6.18284E-04 | 0 | 0 |
N/K | rs199615557 | 0.483 | 0.026 | N | 0.278 | 0.1 | 0.0666544352282 | gnomAD-4.0.0 | 5.21035E-04 | None | None | None | None | N | None | 1.20112E-04 | 5.01169E-05 | None | 0 | 0 | None | 7.82669E-05 | 0 | 6.88657E-04 | 0 | 1.76322E-04 |
N/S | rs1446942544 | 0.266 | 0.896 | N | 0.455 | 0.318 | 0.228597637076 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
N/S | rs1446942544 | 0.266 | 0.896 | N | 0.455 | 0.318 | 0.228597637076 | gnomAD-4.0.0 | 1.5946E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03196E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6296 | likely_pathogenic | 0.5245 | ambiguous | -0.165 | Destabilizing | 0.919 | D | 0.443 | neutral | None | None | None | None | N |
N/C | 0.6772 | likely_pathogenic | 0.6058 | pathogenic | 0.124 | Stabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
N/D | 0.5725 | likely_pathogenic | 0.4385 | ambiguous | 0.016 | Stabilizing | 0.896 | D | 0.43 | neutral | N | 0.482328788 | None | None | N |
N/E | 0.8864 | likely_pathogenic | 0.778 | pathogenic | -0.053 | Destabilizing | 0.851 | D | 0.413 | neutral | None | None | None | None | N |
N/F | 0.8726 | likely_pathogenic | 0.8265 | pathogenic | -0.777 | Destabilizing | 0.996 | D | 0.575 | neutral | None | None | None | None | N |
N/G | 0.5587 | ambiguous | 0.4581 | ambiguous | -0.241 | Destabilizing | 0.919 | D | 0.397 | neutral | None | None | None | None | N |
N/H | 0.3121 | likely_benign | 0.2418 | benign | -0.259 | Destabilizing | 0.984 | D | 0.401 | neutral | N | 0.480121878 | None | None | N |
N/I | 0.7479 | likely_pathogenic | 0.6676 | pathogenic | -0.062 | Destabilizing | 0.984 | D | 0.586 | neutral | N | 0.485806644 | None | None | N |
N/K | 0.8072 | likely_pathogenic | 0.6827 | pathogenic | 0.12 | Stabilizing | 0.026 | N | 0.278 | neutral | N | 0.473730734 | None | None | N |
N/L | 0.6146 | likely_pathogenic | 0.512 | ambiguous | -0.062 | Destabilizing | 0.976 | D | 0.472 | neutral | None | None | None | None | N |
N/M | 0.7237 | likely_pathogenic | 0.6436 | pathogenic | 0.106 | Stabilizing | 0.999 | D | 0.539 | neutral | None | None | None | None | N |
N/P | 0.9128 | likely_pathogenic | 0.8678 | pathogenic | -0.075 | Destabilizing | 0.988 | D | 0.535 | neutral | None | None | None | None | N |
N/Q | 0.7566 | likely_pathogenic | 0.6382 | pathogenic | -0.328 | Destabilizing | 0.507 | D | 0.27 | neutral | None | None | None | None | N |
N/R | 0.7561 | likely_pathogenic | 0.6691 | pathogenic | 0.206 | Stabilizing | 0.851 | D | 0.383 | neutral | None | None | None | None | N |
N/S | 0.1845 | likely_benign | 0.1585 | benign | -0.076 | Destabilizing | 0.896 | D | 0.455 | neutral | N | 0.474018735 | None | None | N |
N/T | 0.397 | ambiguous | 0.3152 | benign | -0.036 | Destabilizing | 0.896 | D | 0.393 | neutral | N | 0.485313165 | None | None | N |
N/V | 0.7505 | likely_pathogenic | 0.6695 | pathogenic | -0.075 | Destabilizing | 0.988 | D | 0.575 | neutral | None | None | None | None | N |
N/W | 0.9467 | likely_pathogenic | 0.9333 | pathogenic | -0.893 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
N/Y | 0.4928 | ambiguous | 0.4301 | ambiguous | -0.577 | Destabilizing | 0.995 | D | 0.535 | neutral | N | 0.489592079 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.