Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17514 | 52765;52766;52767 | chr2:178608343;178608342;178608341 | chr2:179473070;179473069;179473068 |
N2AB | 15873 | 47842;47843;47844 | chr2:178608343;178608342;178608341 | chr2:179473070;179473069;179473068 |
N2A | 14946 | 45061;45062;45063 | chr2:178608343;178608342;178608341 | chr2:179473070;179473069;179473068 |
N2B | 8449 | 25570;25571;25572 | chr2:178608343;178608342;178608341 | chr2:179473070;179473069;179473068 |
Novex-1 | 8574 | 25945;25946;25947 | chr2:178608343;178608342;178608341 | chr2:179473070;179473069;179473068 |
Novex-2 | 8641 | 26146;26147;26148 | chr2:178608343;178608342;178608341 | chr2:179473070;179473069;179473068 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.997 | N | 0.357 | 0.441 | 0.386558576397 | gnomAD-4.0.0 | 1.3696E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79979E-06 | 0 | 0 |
T/P | rs1470590917 | None | 0.997 | N | 0.359 | 0.334 | 0.333906830038 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 2.88018E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/P | rs1470590917 | None | 0.997 | N | 0.359 | 0.334 | 0.333906830038 | gnomAD-4.0.0 | 6.58025E-06 | None | None | None | None | N | None | 0 | 0 | None | 2.88018E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1177 | likely_benign | 0.109 | benign | -0.226 | Destabilizing | 0.911 | D | 0.347 | neutral | N | 0.462222874 | None | None | N |
T/C | 0.6628 | likely_pathogenic | 0.5893 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.4 | neutral | None | None | None | None | N |
T/D | 0.6983 | likely_pathogenic | 0.5753 | pathogenic | 0.085 | Stabilizing | 0.985 | D | 0.326 | neutral | None | None | None | None | N |
T/E | 0.6016 | likely_pathogenic | 0.4887 | ambiguous | -0.003 | Destabilizing | 0.985 | D | 0.347 | neutral | None | None | None | None | N |
T/F | 0.5449 | ambiguous | 0.4634 | ambiguous | -0.867 | Destabilizing | 0.999 | D | 0.488 | neutral | None | None | None | None | N |
T/G | 0.3446 | ambiguous | 0.2886 | benign | -0.3 | Destabilizing | 0.985 | D | 0.377 | neutral | None | None | None | None | N |
T/H | 0.4438 | ambiguous | 0.3838 | ambiguous | -0.463 | Destabilizing | 1.0 | D | 0.5 | neutral | None | None | None | None | N |
T/I | 0.2916 | likely_benign | 0.2593 | benign | -0.154 | Destabilizing | 0.997 | D | 0.357 | neutral | N | 0.451603236 | None | None | N |
T/K | 0.2684 | likely_benign | 0.2263 | benign | -0.266 | Destabilizing | 0.98 | D | 0.326 | neutral | N | 0.40261721 | None | None | N |
T/L | 0.1571 | likely_benign | 0.1337 | benign | -0.154 | Destabilizing | 0.993 | D | 0.345 | neutral | None | None | None | None | N |
T/M | 0.1383 | likely_benign | 0.1313 | benign | -0.141 | Destabilizing | 1.0 | D | 0.365 | neutral | None | None | None | None | N |
T/N | 0.2138 | likely_benign | 0.1918 | benign | -0.043 | Destabilizing | 0.985 | D | 0.287 | neutral | None | None | None | None | N |
T/P | 0.1591 | likely_benign | 0.1316 | benign | -0.153 | Destabilizing | 0.997 | D | 0.359 | neutral | N | 0.455680904 | None | None | N |
T/Q | 0.3349 | likely_benign | 0.2931 | benign | -0.253 | Destabilizing | 0.998 | D | 0.354 | neutral | None | None | None | None | N |
T/R | 0.2921 | likely_benign | 0.2444 | benign | 0.036 | Stabilizing | 0.997 | D | 0.361 | neutral | N | 0.4460427 | None | None | N |
T/S | 0.1589 | likely_benign | 0.1398 | benign | -0.222 | Destabilizing | 0.449 | N | 0.175 | neutral | N | 0.407292311 | None | None | N |
T/V | 0.2181 | likely_benign | 0.1949 | benign | -0.153 | Destabilizing | 0.993 | D | 0.311 | neutral | None | None | None | None | N |
T/W | 0.8239 | likely_pathogenic | 0.7562 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
T/Y | 0.5597 | ambiguous | 0.4674 | ambiguous | -0.622 | Destabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.