Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17517 | 52774;52775;52776 | chr2:178608334;178608333;178608332 | chr2:179473061;179473060;179473059 |
N2AB | 15876 | 47851;47852;47853 | chr2:178608334;178608333;178608332 | chr2:179473061;179473060;179473059 |
N2A | 14949 | 45070;45071;45072 | chr2:178608334;178608333;178608332 | chr2:179473061;179473060;179473059 |
N2B | 8452 | 25579;25580;25581 | chr2:178608334;178608333;178608332 | chr2:179473061;179473060;179473059 |
Novex-1 | 8577 | 25954;25955;25956 | chr2:178608334;178608333;178608332 | chr2:179473061;179473060;179473059 |
Novex-2 | 8644 | 26155;26156;26157 | chr2:178608334;178608333;178608332 | chr2:179473061;179473060;179473059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.784 | N | 0.338 | 0.253 | 0.266843984389 | gnomAD-4.0.0 | 4.78289E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58767E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0675 | likely_benign | 0.0797 | benign | -0.661 | Destabilizing | 0.001 | N | 0.105 | neutral | N | 0.43640171 | None | None | I |
S/C | 0.0972 | likely_benign | 0.1107 | benign | -0.373 | Destabilizing | 0.927 | D | 0.343 | neutral | N | 0.51615336 | None | None | I |
S/D | 0.7741 | likely_pathogenic | 0.7205 | pathogenic | -0.259 | Destabilizing | 0.704 | D | 0.241 | neutral | None | None | None | None | I |
S/E | 0.7268 | likely_pathogenic | 0.6479 | pathogenic | -0.234 | Destabilizing | 0.704 | D | 0.253 | neutral | None | None | None | None | I |
S/F | 0.2705 | likely_benign | 0.277 | benign | -0.688 | Destabilizing | 0.927 | D | 0.391 | neutral | N | 0.485830453 | None | None | I |
S/G | 0.1393 | likely_benign | 0.1585 | benign | -0.939 | Destabilizing | 0.329 | N | 0.262 | neutral | None | None | None | None | I |
S/H | 0.4793 | ambiguous | 0.4524 | ambiguous | -1.351 | Destabilizing | 0.981 | D | 0.343 | neutral | None | None | None | None | I |
S/I | 0.15 | likely_benign | 0.1641 | benign | -0.018 | Destabilizing | 0.704 | D | 0.357 | neutral | None | None | None | None | I |
S/K | 0.8344 | likely_pathogenic | 0.8009 | pathogenic | -0.765 | Destabilizing | 0.704 | D | 0.251 | neutral | None | None | None | None | I |
S/L | 0.1014 | likely_benign | 0.121 | benign | -0.018 | Destabilizing | 0.329 | N | 0.318 | neutral | None | None | None | None | I |
S/M | 0.1569 | likely_benign | 0.164 | benign | 0.102 | Stabilizing | 0.981 | D | 0.346 | neutral | None | None | None | None | I |
S/N | 0.2019 | likely_benign | 0.2189 | benign | -0.752 | Destabilizing | 0.704 | D | 0.275 | neutral | None | None | None | None | I |
S/P | 0.9225 | likely_pathogenic | 0.9306 | pathogenic | -0.197 | Destabilizing | 0.784 | D | 0.338 | neutral | N | 0.50764852 | None | None | I |
S/Q | 0.5352 | ambiguous | 0.5145 | ambiguous | -0.791 | Destabilizing | 0.944 | D | 0.36 | neutral | None | None | None | None | I |
S/R | 0.8028 | likely_pathogenic | 0.7698 | pathogenic | -0.706 | Destabilizing | 0.828 | D | 0.34 | neutral | None | None | None | None | I |
S/T | 0.0824 | likely_benign | 0.0841 | benign | -0.708 | Destabilizing | 0.003 | N | 0.091 | neutral | N | 0.397787394 | None | None | I |
S/V | 0.1368 | likely_benign | 0.1466 | benign | -0.197 | Destabilizing | 0.329 | N | 0.318 | neutral | None | None | None | None | I |
S/W | 0.5051 | ambiguous | 0.4815 | ambiguous | -0.757 | Destabilizing | 0.995 | D | 0.441 | neutral | None | None | None | None | I |
S/Y | 0.259 | likely_benign | 0.2607 | benign | -0.478 | Destabilizing | 0.975 | D | 0.395 | neutral | N | 0.492911141 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.