Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17519 | 52780;52781;52782 | chr2:178608328;178608327;178608326 | chr2:179473055;179473054;179473053 |
N2AB | 15878 | 47857;47858;47859 | chr2:178608328;178608327;178608326 | chr2:179473055;179473054;179473053 |
N2A | 14951 | 45076;45077;45078 | chr2:178608328;178608327;178608326 | chr2:179473055;179473054;179473053 |
N2B | 8454 | 25585;25586;25587 | chr2:178608328;178608327;178608326 | chr2:179473055;179473054;179473053 |
Novex-1 | 8579 | 25960;25961;25962 | chr2:178608328;178608327;178608326 | chr2:179473055;179473054;179473053 |
Novex-2 | 8646 | 26161;26162;26163 | chr2:178608328;178608327;178608326 | chr2:179473055;179473054;179473053 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 1.0 | N | 0.828 | 0.472 | 0.603745951297 | gnomAD-4.0.0 | 1.59428E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86254E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.301 | likely_benign | 0.3313 | benign | -1.259 | Destabilizing | 0.999 | D | 0.549 | neutral | N | 0.479539198 | None | None | N |
V/C | 0.7552 | likely_pathogenic | 0.7553 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/D | 0.8812 | likely_pathogenic | 0.9214 | pathogenic | -0.849 | Destabilizing | 1.0 | D | 0.856 | deleterious | N | 0.502007887 | None | None | N |
V/E | 0.7039 | likely_pathogenic | 0.7697 | pathogenic | -0.832 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
V/F | 0.395 | ambiguous | 0.484 | ambiguous | -0.89 | Destabilizing | 1.0 | D | 0.828 | deleterious | N | 0.476595797 | None | None | N |
V/G | 0.4975 | ambiguous | 0.5734 | pathogenic | -1.586 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.507034317 | None | None | N |
V/H | 0.9051 | likely_pathogenic | 0.9232 | pathogenic | -1.07 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/I | 0.0958 | likely_benign | 0.1027 | benign | -0.463 | Destabilizing | 0.997 | D | 0.471 | neutral | N | 0.479923201 | None | None | N |
V/K | 0.8631 | likely_pathogenic | 0.8859 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
V/L | 0.4199 | ambiguous | 0.4927 | ambiguous | -0.463 | Destabilizing | 0.997 | D | 0.529 | neutral | N | 0.486849173 | None | None | N |
V/M | 0.3271 | likely_benign | 0.3877 | ambiguous | -0.419 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/N | 0.7309 | likely_pathogenic | 0.8051 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/P | 0.9312 | likely_pathogenic | 0.9424 | pathogenic | -0.692 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/Q | 0.7118 | likely_pathogenic | 0.7751 | pathogenic | -1.045 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/R | 0.8313 | likely_pathogenic | 0.8636 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/S | 0.5347 | ambiguous | 0.6188 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/T | 0.4783 | ambiguous | 0.5441 | ambiguous | -1.358 | Destabilizing | 0.999 | D | 0.558 | neutral | None | None | None | None | N |
V/W | 0.9603 | likely_pathogenic | 0.9674 | pathogenic | -1.094 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.8311 | likely_pathogenic | 0.8583 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.