Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17533 | 52822;52823;52824 | chr2:178608286;178608285;178608284 | chr2:179473013;179473012;179473011 |
N2AB | 15892 | 47899;47900;47901 | chr2:178608286;178608285;178608284 | chr2:179473013;179473012;179473011 |
N2A | 14965 | 45118;45119;45120 | chr2:178608286;178608285;178608284 | chr2:179473013;179473012;179473011 |
N2B | 8468 | 25627;25628;25629 | chr2:178608286;178608285;178608284 | chr2:179473013;179473012;179473011 |
Novex-1 | 8593 | 26002;26003;26004 | chr2:178608286;178608285;178608284 | chr2:179473013;179473012;179473011 |
Novex-2 | 8660 | 26203;26204;26205 | chr2:178608286;178608285;178608284 | chr2:179473013;179473012;179473011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | rs2055410849 | None | 1.0 | D | 0.722 | 0.66 | 0.723393103801 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/C | rs2055410849 | None | 1.0 | D | 0.722 | 0.66 | 0.723393103801 | gnomAD-4.0.0 | 6.58111E-06 | None | None | None | None | N | None | 2.41546E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3344 | likely_benign | 0.324 | benign | -0.335 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.508206994 | None | None | N |
G/C | 0.3646 | ambiguous | 0.345 | ambiguous | -0.866 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | D | 0.538935002 | None | None | N |
G/D | 0.3763 | ambiguous | 0.3549 | ambiguous | -0.419 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.491489775 | None | None | N |
G/E | 0.5226 | ambiguous | 0.5094 | ambiguous | -0.552 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
G/F | 0.786 | likely_pathogenic | 0.7887 | pathogenic | -0.927 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
G/H | 0.6071 | likely_pathogenic | 0.5554 | ambiguous | -0.601 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
G/I | 0.6727 | likely_pathogenic | 0.6747 | pathogenic | -0.322 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
G/K | 0.7706 | likely_pathogenic | 0.7012 | pathogenic | -0.829 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
G/L | 0.7557 | likely_pathogenic | 0.7479 | pathogenic | -0.322 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
G/M | 0.7282 | likely_pathogenic | 0.7049 | pathogenic | -0.429 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
G/N | 0.3325 | likely_benign | 0.3071 | benign | -0.477 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
G/P | 0.9664 | likely_pathogenic | 0.9684 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
G/Q | 0.5978 | likely_pathogenic | 0.5609 | ambiguous | -0.71 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
G/R | 0.6543 | likely_pathogenic | 0.5948 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.481962438 | None | None | N |
G/S | 0.1658 | likely_benign | 0.1637 | benign | -0.694 | Destabilizing | 1.0 | D | 0.754 | deleterious | N | 0.479947748 | None | None | N |
G/T | 0.3493 | ambiguous | 0.3409 | ambiguous | -0.74 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
G/V | 0.543 | ambiguous | 0.5482 | ambiguous | -0.29 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.538428023 | None | None | N |
G/W | 0.7237 | likely_pathogenic | 0.697 | pathogenic | -1.122 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
G/Y | 0.6709 | likely_pathogenic | 0.6517 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.