Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17535 | 52828;52829;52830 | chr2:178608280;178608279;178608278 | chr2:179473007;179473006;179473005 |
N2AB | 15894 | 47905;47906;47907 | chr2:178608280;178608279;178608278 | chr2:179473007;179473006;179473005 |
N2A | 14967 | 45124;45125;45126 | chr2:178608280;178608279;178608278 | chr2:179473007;179473006;179473005 |
N2B | 8470 | 25633;25634;25635 | chr2:178608280;178608279;178608278 | chr2:179473007;179473006;179473005 |
Novex-1 | 8595 | 26008;26009;26010 | chr2:178608280;178608279;178608278 | chr2:179473007;179473006;179473005 |
Novex-2 | 8662 | 26209;26210;26211 | chr2:178608280;178608279;178608278 | chr2:179473007;179473006;179473005 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.992 | N | 0.403 | 0.23 | 0.346315397577 | gnomAD-4.0.0 | 1.59531E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88658E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5507 | ambiguous | 0.4363 | ambiguous | -1.16 | Destabilizing | 0.997 | D | 0.591 | neutral | None | None | None | None | N |
L/C | 0.7896 | likely_pathogenic | 0.7209 | pathogenic | -0.896 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
L/D | 0.9331 | likely_pathogenic | 0.8883 | pathogenic | -0.047 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
L/E | 0.7258 | likely_pathogenic | 0.6105 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
L/F | 0.3866 | ambiguous | 0.3253 | benign | -0.709 | Destabilizing | 0.999 | D | 0.675 | neutral | N | 0.492623139 | None | None | N |
L/G | 0.8512 | likely_pathogenic | 0.7867 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/H | 0.5661 | likely_pathogenic | 0.4516 | ambiguous | -0.433 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
L/I | 0.1696 | likely_benign | 0.147 | benign | -0.479 | Destabilizing | 0.992 | D | 0.403 | neutral | N | 0.402675925 | None | None | N |
L/K | 0.6065 | likely_pathogenic | 0.4831 | ambiguous | -0.592 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
L/M | 0.1836 | likely_benign | 0.1482 | benign | -0.575 | Destabilizing | 0.985 | D | 0.351 | neutral | None | None | None | None | N |
L/N | 0.757 | likely_pathogenic | 0.655 | pathogenic | -0.514 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
L/P | 0.8283 | likely_pathogenic | 0.7673 | pathogenic | -0.673 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/Q | 0.357 | ambiguous | 0.2613 | benign | -0.614 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/R | 0.4886 | ambiguous | 0.4066 | ambiguous | -0.086 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
L/S | 0.6724 | likely_pathogenic | 0.5455 | ambiguous | -1.186 | Destabilizing | 0.999 | D | 0.672 | neutral | N | 0.44490655 | None | None | N |
L/T | 0.4659 | ambiguous | 0.3267 | benign | -1.052 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
L/V | 0.1841 | likely_benign | 0.1475 | benign | -0.673 | Destabilizing | 0.992 | D | 0.403 | neutral | N | 0.429457095 | None | None | N |
L/W | 0.5362 | ambiguous | 0.468 | ambiguous | -0.714 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
L/Y | 0.6751 | likely_pathogenic | 0.6054 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.