Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17554 | 52885;52886;52887 | chr2:178608223;178608222;178608221 | chr2:179472950;179472949;179472948 |
N2AB | 15913 | 47962;47963;47964 | chr2:178608223;178608222;178608221 | chr2:179472950;179472949;179472948 |
N2A | 14986 | 45181;45182;45183 | chr2:178608223;178608222;178608221 | chr2:179472950;179472949;179472948 |
N2B | 8489 | 25690;25691;25692 | chr2:178608223;178608222;178608221 | chr2:179472950;179472949;179472948 |
Novex-1 | 8614 | 26065;26066;26067 | chr2:178608223;178608222;178608221 | chr2:179472950;179472949;179472948 |
Novex-2 | 8681 | 26266;26267;26268 | chr2:178608223;178608222;178608221 | chr2:179472950;179472949;179472948 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs758615635 | 0.244 | 1.0 | N | 0.746 | 0.317 | 0.267755039894 | gnomAD-2.1.1 | 4.15E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.45E-05 | None | 0 | 0 | 0 |
K/N | rs758615635 | 0.244 | 1.0 | N | 0.746 | 0.317 | 0.267755039894 | gnomAD-4.0.0 | 1.61373E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45926E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2636 | likely_benign | 0.246 | benign | -0.023 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/C | 0.6686 | likely_pathogenic | 0.6431 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
K/D | 0.4342 | ambiguous | 0.4119 | ambiguous | 0.037 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
K/E | 0.1692 | likely_benign | 0.1518 | benign | 0.039 | Stabilizing | 0.999 | D | 0.676 | prob.neutral | N | 0.430937175 | None | None | I |
K/F | 0.7419 | likely_pathogenic | 0.7055 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
K/G | 0.4456 | ambiguous | 0.404 | ambiguous | -0.203 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
K/H | 0.338 | likely_benign | 0.3217 | benign | -0.445 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
K/I | 0.2576 | likely_benign | 0.2392 | benign | 0.37 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
K/L | 0.2957 | likely_benign | 0.2814 | benign | 0.37 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
K/M | 0.2371 | likely_benign | 0.2157 | benign | 0.132 | Stabilizing | 1.0 | D | 0.639 | neutral | N | 0.47756053 | None | None | I |
K/N | 0.285 | likely_benign | 0.2683 | benign | 0.22 | Stabilizing | 1.0 | D | 0.746 | deleterious | N | 0.470470185 | None | None | I |
K/P | 0.327 | likely_benign | 0.316 | benign | 0.266 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
K/Q | 0.141 | likely_benign | 0.1344 | benign | 0.054 | Stabilizing | 1.0 | D | 0.742 | deleterious | N | 0.49419922 | None | None | I |
K/R | 0.093 | likely_benign | 0.092 | benign | -0.016 | Destabilizing | 0.999 | D | 0.635 | neutral | N | 0.49419922 | None | None | I |
K/S | 0.3372 | likely_benign | 0.3152 | benign | -0.247 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | I |
K/T | 0.1705 | likely_benign | 0.1559 | benign | -0.102 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.514921209 | None | None | I |
K/V | 0.2382 | likely_benign | 0.2185 | benign | 0.266 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
K/W | 0.8284 | likely_pathogenic | 0.7917 | pathogenic | -0.305 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
K/Y | 0.6005 | likely_pathogenic | 0.5731 | pathogenic | 0.05 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.