Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17557 | 52894;52895;52896 | chr2:178608214;178608213;178608212 | chr2:179472941;179472940;179472939 |
N2AB | 15916 | 47971;47972;47973 | chr2:178608214;178608213;178608212 | chr2:179472941;179472940;179472939 |
N2A | 14989 | 45190;45191;45192 | chr2:178608214;178608213;178608212 | chr2:179472941;179472940;179472939 |
N2B | 8492 | 25699;25700;25701 | chr2:178608214;178608213;178608212 | chr2:179472941;179472940;179472939 |
Novex-1 | 8617 | 26074;26075;26076 | chr2:178608214;178608213;178608212 | chr2:179472941;179472940;179472939 |
Novex-2 | 8684 | 26275;26276;26277 | chr2:178608214;178608213;178608212 | chr2:179472941;179472940;179472939 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs986749140 | None | 0.651 | N | 0.524 | 0.124 | 0.19670166235 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs986749140 | None | 0.651 | N | 0.524 | 0.124 | 0.19670166235 | gnomAD-4.0.0 | 1.86965E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.55337E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0792 | likely_benign | 0.0745 | benign | -1.233 | Destabilizing | 0.278 | N | 0.453 | neutral | N | 0.454792683 | None | None | I |
P/C | 0.5078 | ambiguous | 0.4115 | ambiguous | -0.742 | Destabilizing | 0.995 | D | 0.8 | deleterious | None | None | None | None | I |
P/D | 0.4292 | ambiguous | 0.3652 | ambiguous | -1.01 | Destabilizing | 0.946 | D | 0.517 | neutral | None | None | None | None | I |
P/E | 0.217 | likely_benign | 0.1958 | benign | -1.082 | Destabilizing | 0.946 | D | 0.507 | neutral | None | None | None | None | I |
P/F | 0.386 | ambiguous | 0.3045 | benign | -1.16 | Destabilizing | 0.946 | D | 0.782 | deleterious | None | None | None | None | I |
P/G | 0.3575 | ambiguous | 0.3048 | benign | -1.466 | Destabilizing | 0.008 | N | 0.428 | neutral | None | None | None | None | I |
P/H | 0.2335 | likely_benign | 0.1991 | benign | -0.928 | Destabilizing | 0.995 | D | 0.712 | prob.delet. | None | None | None | None | I |
P/I | 0.1637 | likely_benign | 0.1385 | benign | -0.726 | Destabilizing | 0.071 | N | 0.529 | neutral | None | None | None | None | I |
P/K | 0.2975 | likely_benign | 0.2688 | benign | -0.966 | Destabilizing | 0.946 | D | 0.514 | neutral | None | None | None | None | I |
P/L | 0.0794 | likely_benign | 0.0726 | benign | -0.726 | Destabilizing | 0.483 | N | 0.597 | neutral | N | 0.466433828 | None | None | I |
P/M | 0.2037 | likely_benign | 0.1858 | benign | -0.455 | Destabilizing | 0.946 | D | 0.708 | prob.delet. | None | None | None | None | I |
P/N | 0.3405 | ambiguous | 0.2988 | benign | -0.659 | Destabilizing | 0.946 | D | 0.722 | deleterious | None | None | None | None | I |
P/Q | 0.1497 | likely_benign | 0.142 | benign | -0.937 | Destabilizing | 0.976 | D | 0.597 | neutral | N | 0.466105754 | None | None | I |
P/R | 0.2486 | likely_benign | 0.2144 | benign | -0.33 | Destabilizing | 0.976 | D | 0.709 | prob.delet. | N | 0.479824413 | None | None | I |
P/S | 0.1304 | likely_benign | 0.118 | benign | -1.108 | Destabilizing | 0.651 | D | 0.524 | neutral | N | 0.448538714 | None | None | I |
P/T | 0.1178 | likely_benign | 0.1046 | benign | -1.082 | Destabilizing | 0.651 | D | 0.527 | neutral | N | 0.479304338 | None | None | I |
P/V | 0.1242 | likely_benign | 0.1099 | benign | -0.86 | Destabilizing | 0.008 | N | 0.492 | neutral | None | None | None | None | I |
P/W | 0.6718 | likely_pathogenic | 0.559 | ambiguous | -1.246 | Destabilizing | 0.995 | D | 0.761 | deleterious | None | None | None | None | I |
P/Y | 0.4051 | ambiguous | 0.3206 | benign | -0.983 | Destabilizing | 0.982 | D | 0.797 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.