Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17559 | 52900;52901;52902 | chr2:178608208;178608207;178608206 | chr2:179472935;179472934;179472933 |
N2AB | 15918 | 47977;47978;47979 | chr2:178608208;178608207;178608206 | chr2:179472935;179472934;179472933 |
N2A | 14991 | 45196;45197;45198 | chr2:178608208;178608207;178608206 | chr2:179472935;179472934;179472933 |
N2B | 8494 | 25705;25706;25707 | chr2:178608208;178608207;178608206 | chr2:179472935;179472934;179472933 |
Novex-1 | 8619 | 26080;26081;26082 | chr2:178608208;178608207;178608206 | chr2:179472935;179472934;179472933 |
Novex-2 | 8686 | 26281;26282;26283 | chr2:178608208;178608207;178608206 | chr2:179472935;179472934;179472933 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs2055393436 | None | 0.994 | N | 0.633 | 0.188 | 0.340032825777 | gnomAD-4.0.0 | 1.20032E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.4944 | ambiguous | 0.4167 | ambiguous | -0.615 | Destabilizing | 0.994 | D | 0.633 | neutral | N | 0.485808828 | None | None | N |
S/C | 0.5032 | ambiguous | 0.3556 | ambiguous | -0.404 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
S/D | 0.9921 | likely_pathogenic | 0.9878 | pathogenic | -0.851 | Destabilizing | 0.998 | D | 0.664 | prob.neutral | None | None | None | None | N |
S/E | 0.9969 | likely_pathogenic | 0.9956 | pathogenic | -0.726 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | N |
S/F | 0.9944 | likely_pathogenic | 0.9876 | pathogenic | -0.385 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
S/G | 0.5697 | likely_pathogenic | 0.4876 | ambiguous | -0.987 | Destabilizing | 0.998 | D | 0.703 | prob.delet. | None | None | None | None | N |
S/H | 0.9934 | likely_pathogenic | 0.9897 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
S/I | 0.9762 | likely_pathogenic | 0.956 | pathogenic | 0.304 | Stabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
S/K | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -0.565 | Destabilizing | 0.998 | D | 0.663 | prob.neutral | None | None | None | None | N |
S/L | 0.8956 | likely_pathogenic | 0.8271 | pathogenic | 0.304 | Stabilizing | 0.999 | D | 0.781 | deleterious | N | 0.479755213 | None | None | N |
S/M | 0.9345 | likely_pathogenic | 0.8846 | pathogenic | 0.29 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
S/N | 0.9683 | likely_pathogenic | 0.9486 | pathogenic | -0.92 | Destabilizing | 0.998 | D | 0.694 | prob.delet. | None | None | None | None | N |
S/P | 0.995 | likely_pathogenic | 0.9896 | pathogenic | 0.034 | Stabilizing | 0.999 | D | 0.84 | deleterious | N | 0.5140813 | None | None | N |
S/Q | 0.9956 | likely_pathogenic | 0.9935 | pathogenic | -0.775 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
S/R | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | -0.805 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
S/T | 0.2262 | likely_benign | 0.1608 | benign | -0.69 | Destabilizing | 0.997 | D | 0.692 | prob.delet. | N | 0.476802751 | None | None | N |
S/V | 0.9301 | likely_pathogenic | 0.8815 | pathogenic | 0.034 | Stabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
S/W | 0.9956 | likely_pathogenic | 0.9931 | pathogenic | -0.589 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
S/Y | 0.9942 | likely_pathogenic | 0.9899 | pathogenic | -0.205 | Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.