Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17561 | 52906;52907;52908 | chr2:178608202;178608201;178608200 | chr2:179472929;179472928;179472927 |
N2AB | 15920 | 47983;47984;47985 | chr2:178608202;178608201;178608200 | chr2:179472929;179472928;179472927 |
N2A | 14993 | 45202;45203;45204 | chr2:178608202;178608201;178608200 | chr2:179472929;179472928;179472927 |
N2B | 8496 | 25711;25712;25713 | chr2:178608202;178608201;178608200 | chr2:179472929;179472928;179472927 |
Novex-1 | 8621 | 26086;26087;26088 | chr2:178608202;178608201;178608200 | chr2:179472929;179472928;179472927 |
Novex-2 | 8688 | 26287;26288;26289 | chr2:178608202;178608201;178608200 | chr2:179472929;179472928;179472927 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs1344423828 | -0.19 | 0.09 | N | 0.498 | 0.291 | 0.262662153117 | gnomAD-2.1.1 | 4.18E-06 | None | None | None | None | N | None | 0 | 3.01E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/H | rs1344423828 | -0.19 | 0.09 | N | 0.498 | 0.291 | 0.262662153117 | gnomAD-4.0.0 | 1.61864E-06 | None | None | None | None | N | None | 0 | 2.34896E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1202 | likely_benign | 0.1381 | benign | -0.638 | Destabilizing | 0.856 | D | 0.767 | deleterious | N | 0.492385492 | None | None | N |
P/C | 0.685 | likely_pathogenic | 0.6692 | pathogenic | -0.651 | Destabilizing | 0.998 | D | 0.86 | deleterious | None | None | None | None | N |
P/D | 0.8451 | likely_pathogenic | 0.8451 | pathogenic | -0.38 | Destabilizing | 0.965 | D | 0.811 | deleterious | None | None | None | None | N |
P/E | 0.5306 | ambiguous | 0.5596 | ambiguous | -0.478 | Destabilizing | 0.965 | D | 0.75 | deleterious | None | None | None | None | N |
P/F | 0.6576 | likely_pathogenic | 0.6564 | pathogenic | -0.753 | Destabilizing | 0.995 | D | 0.889 | deleterious | None | None | None | None | N |
P/G | 0.5525 | ambiguous | 0.5935 | pathogenic | -0.81 | Destabilizing | 0.965 | D | 0.763 | deleterious | None | None | None | None | N |
P/H | 0.435 | ambiguous | 0.4301 | ambiguous | -0.377 | Destabilizing | 0.09 | N | 0.498 | neutral | N | 0.480301872 | None | None | N |
P/I | 0.4608 | ambiguous | 0.4585 | ambiguous | -0.326 | Destabilizing | 0.982 | D | 0.882 | deleterious | None | None | None | None | N |
P/K | 0.575 | likely_pathogenic | 0.5864 | pathogenic | -0.561 | Destabilizing | 0.965 | D | 0.81 | deleterious | None | None | None | None | N |
P/L | 0.2267 | likely_benign | 0.2263 | benign | -0.326 | Destabilizing | 0.954 | D | 0.814 | deleterious | N | 0.508373664 | None | None | N |
P/M | 0.467 | ambiguous | 0.4824 | ambiguous | -0.334 | Destabilizing | 0.998 | D | 0.885 | deleterious | None | None | None | None | N |
P/N | 0.6979 | likely_pathogenic | 0.7036 | pathogenic | -0.289 | Destabilizing | 0.932 | D | 0.852 | deleterious | None | None | None | None | N |
P/Q | 0.3195 | likely_benign | 0.3301 | benign | -0.529 | Destabilizing | 0.965 | D | 0.801 | deleterious | None | None | None | None | N |
P/R | 0.3895 | ambiguous | 0.3904 | ambiguous | -0.034 | Destabilizing | 0.954 | D | 0.821 | deleterious | N | 0.515398424 | None | None | N |
P/S | 0.2692 | likely_benign | 0.3093 | benign | -0.685 | Destabilizing | 0.954 | D | 0.722 | deleterious | N | 0.492252206 | None | None | N |
P/T | 0.2251 | likely_benign | 0.2355 | benign | -0.679 | Destabilizing | 0.977 | D | 0.819 | deleterious | N | 0.467767025 | None | None | N |
P/V | 0.3281 | likely_benign | 0.3229 | benign | -0.393 | Destabilizing | 0.982 | D | 0.835 | deleterious | None | None | None | None | N |
P/W | 0.8412 | likely_pathogenic | 0.8341 | pathogenic | -0.843 | Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
P/Y | 0.664 | likely_pathogenic | 0.6601 | pathogenic | -0.542 | Destabilizing | 0.932 | D | 0.878 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.