Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17564 | 52915;52916;52917 | chr2:178608193;178608192;178608191 | chr2:179472920;179472919;179472918 |
N2AB | 15923 | 47992;47993;47994 | chr2:178608193;178608192;178608191 | chr2:179472920;179472919;179472918 |
N2A | 14996 | 45211;45212;45213 | chr2:178608193;178608192;178608191 | chr2:179472920;179472919;179472918 |
N2B | 8499 | 25720;25721;25722 | chr2:178608193;178608192;178608191 | chr2:179472920;179472919;179472918 |
Novex-1 | 8624 | 26095;26096;26097 | chr2:178608193;178608192;178608191 | chr2:179472920;179472919;179472918 |
Novex-2 | 8691 | 26296;26297;26298 | chr2:178608193;178608192;178608191 | chr2:179472920;179472919;179472918 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.015 | N | 0.347 | 0.279 | 0.214338557667 | gnomAD-4.0.0 | 1.62001E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.90476E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5819 | likely_pathogenic | 0.6497 | pathogenic | -2.032 | Highly Destabilizing | 0.996 | D | 0.701 | prob.delet. | None | None | None | None | N |
A/D | 0.9978 | likely_pathogenic | 0.9982 | pathogenic | -3.206 | Highly Destabilizing | 0.953 | D | 0.757 | deleterious | None | None | None | None | N |
A/E | 0.9949 | likely_pathogenic | 0.9965 | pathogenic | -3.113 | Highly Destabilizing | 0.938 | D | 0.693 | prob.delet. | N | 0.485143129 | None | None | N |
A/F | 0.9828 | likely_pathogenic | 0.9854 | pathogenic | -0.919 | Destabilizing | 0.909 | D | 0.743 | deleterious | None | None | None | None | N |
A/G | 0.6859 | likely_pathogenic | 0.6902 | pathogenic | -1.282 | Destabilizing | 0.813 | D | 0.555 | neutral | N | 0.466696479 | None | None | N |
A/H | 0.996 | likely_pathogenic | 0.997 | pathogenic | -1.307 | Destabilizing | 0.996 | D | 0.76 | deleterious | None | None | None | None | N |
A/I | 0.8801 | likely_pathogenic | 0.8953 | pathogenic | -0.235 | Destabilizing | 0.329 | N | 0.649 | prob.neutral | None | None | None | None | N |
A/K | 0.9979 | likely_pathogenic | 0.9986 | pathogenic | -1.388 | Destabilizing | 0.953 | D | 0.676 | prob.neutral | None | None | None | None | N |
A/L | 0.8031 | likely_pathogenic | 0.843 | pathogenic | -0.235 | Destabilizing | 0.587 | D | 0.604 | neutral | None | None | None | None | N |
A/M | 0.8991 | likely_pathogenic | 0.924 | pathogenic | -0.703 | Destabilizing | 0.974 | D | 0.726 | deleterious | None | None | None | None | N |
A/N | 0.9882 | likely_pathogenic | 0.9899 | pathogenic | -1.8 | Destabilizing | 0.953 | D | 0.746 | deleterious | None | None | None | None | N |
A/P | 0.9317 | likely_pathogenic | 0.897 | pathogenic | -0.448 | Destabilizing | 0.979 | D | 0.715 | prob.delet. | N | 0.485396618 | None | None | N |
A/Q | 0.9861 | likely_pathogenic | 0.991 | pathogenic | -1.855 | Destabilizing | 0.984 | D | 0.683 | prob.neutral | None | None | None | None | N |
A/R | 0.9867 | likely_pathogenic | 0.9924 | pathogenic | -1.172 | Destabilizing | 0.953 | D | 0.691 | prob.delet. | None | None | None | None | N |
A/S | 0.4312 | ambiguous | 0.4553 | ambiguous | -2.005 | Highly Destabilizing | 0.518 | D | 0.552 | neutral | N | 0.484889639 | None | None | N |
A/T | 0.734 | likely_pathogenic | 0.7557 | pathogenic | -1.823 | Destabilizing | 0.062 | N | 0.341 | neutral | N | 0.466696479 | None | None | N |
A/V | 0.6535 | likely_pathogenic | 0.6852 | pathogenic | -0.448 | Destabilizing | 0.015 | N | 0.347 | neutral | N | 0.458374686 | None | None | N |
A/W | 0.9986 | likely_pathogenic | 0.9991 | pathogenic | -1.47 | Destabilizing | 0.996 | D | 0.749 | deleterious | None | None | None | None | N |
A/Y | 0.9942 | likely_pathogenic | 0.9956 | pathogenic | -1.002 | Destabilizing | 0.953 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.