Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17565 | 52918;52919;52920 | chr2:178608190;178608189;178608188 | chr2:179472917;179472916;179472915 |
N2AB | 15924 | 47995;47996;47997 | chr2:178608190;178608189;178608188 | chr2:179472917;179472916;179472915 |
N2A | 14997 | 45214;45215;45216 | chr2:178608190;178608189;178608188 | chr2:179472917;179472916;179472915 |
N2B | 8500 | 25723;25724;25725 | chr2:178608190;178608189;178608188 | chr2:179472917;179472916;179472915 |
Novex-1 | 8625 | 26098;26099;26100 | chr2:178608190;178608189;178608188 | chr2:179472917;179472916;179472915 |
Novex-2 | 8692 | 26299;26300;26301 | chr2:178608190;178608189;178608188 | chr2:179472917;179472916;179472915 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs370126872 | 0.238 | 0.001 | N | 0.245 | 0.082 | 0.141422826196 | gnomAD-2.1.1 | 2.94E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.46E-05 | 0 |
H/D | rs370126872 | 0.238 | 0.001 | N | 0.245 | 0.082 | 0.141422826196 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.89E-05 | 0 | 0 |
H/D | rs370126872 | 0.238 | 0.001 | N | 0.245 | 0.082 | 0.141422826196 | gnomAD-4.0.0 | 3.43237E-05 | None | None | None | None | N | None | 1.34416E-05 | 0 | None | 0 | 0 | None | 1.57684E-05 | 4.98836E-04 | 4.25862E-05 | 0 | 0 |
H/N | None | 0.204 | 0.001 | N | 0.12 | 0.067 | None | gnomAD-2.1.1 | 1.85E-05 | None | None | None | None | N | None | 0 | 5.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 2.42E-05 | 0 |
H/N | None | 0.204 | 0.001 | N | 0.12 | 0.067 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
H/N | None | 0.204 | 0.001 | N | 0.12 | 0.067 | None | gnomAD-4.0.0 | 4.99254E-06 | None | None | None | None | N | None | 0 | 5.1212E-05 | None | 0 | 0 | None | 0 | 0 | 4.25861E-06 | 0 | 0 |
H/Q | None | None | None | N | 0.069 | 0.089 | 0.0920862733494 | gnomAD-4.0.0 | 1.61956E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.90402E-06 | 0 | 0 |
H/R | None | None | None | N | 0.056 | 0.147 | 0.0482279557977 | gnomAD-4.0.0 | 1.62009E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.07977E-05 |
H/Y | rs370126872 | 0.671 | 0.006 | N | 0.173 | 0.101 | 0.180583059064 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1746 | likely_benign | 0.1767 | benign | -0.107 | Destabilizing | None | N | 0.248 | neutral | None | None | None | None | N |
H/C | 0.0965 | likely_benign | 0.091 | benign | 0.489 | Stabilizing | 0.176 | N | 0.41 | neutral | None | None | None | None | N |
H/D | 0.2587 | likely_benign | 0.2641 | benign | 0.037 | Stabilizing | 0.001 | N | 0.245 | neutral | N | 0.408441531 | None | None | N |
H/E | 0.1803 | likely_benign | 0.1787 | benign | 0.052 | Stabilizing | None | N | 0.087 | neutral | None | None | None | None | N |
H/F | 0.2433 | likely_benign | 0.231 | benign | 0.197 | Stabilizing | 0.02 | N | 0.427 | neutral | None | None | None | None | N |
H/G | 0.2208 | likely_benign | 0.2337 | benign | -0.38 | Destabilizing | None | N | 0.278 | neutral | None | None | None | None | N |
H/I | 0.2052 | likely_benign | 0.1954 | benign | 0.585 | Stabilizing | 0.008 | N | 0.419 | neutral | None | None | None | None | N |
H/K | 0.1195 | likely_benign | 0.1235 | benign | -0.07 | Destabilizing | None | N | 0.248 | neutral | None | None | None | None | N |
H/L | 0.0775 | likely_benign | 0.0853 | benign | 0.585 | Stabilizing | 0.001 | N | 0.285 | neutral | N | 0.371694083 | None | None | N |
H/M | 0.2578 | likely_benign | 0.2563 | benign | 0.579 | Stabilizing | 0.02 | N | 0.5 | neutral | None | None | None | None | N |
H/N | 0.1126 | likely_benign | 0.1144 | benign | 0.158 | Stabilizing | 0.001 | N | 0.12 | neutral | N | 0.422872265 | None | None | N |
H/P | 0.6397 | likely_pathogenic | 0.6719 | pathogenic | 0.379 | Stabilizing | 0.006 | N | 0.268 | neutral | N | 0.369133781 | None | None | N |
H/Q | 0.0833 | likely_benign | 0.079 | benign | 0.203 | Stabilizing | None | N | 0.069 | neutral | N | 0.308066679 | None | None | N |
H/R | 0.0612 | likely_benign | 0.0597 | benign | -0.401 | Destabilizing | None | N | 0.056 | neutral | N | 0.324478927 | None | None | N |
H/S | 0.1607 | likely_benign | 0.1639 | benign | 0.101 | Stabilizing | None | N | 0.102 | neutral | None | None | None | None | N |
H/T | 0.168 | likely_benign | 0.1685 | benign | 0.205 | Stabilizing | 0.001 | N | 0.275 | neutral | None | None | None | None | N |
H/V | 0.1464 | likely_benign | 0.1482 | benign | 0.379 | Stabilizing | 0.002 | N | 0.347 | neutral | None | None | None | None | N |
H/W | 0.2877 | likely_benign | 0.2809 | benign | 0.193 | Stabilizing | 0.176 | N | 0.395 | neutral | None | None | None | None | N |
H/Y | 0.0975 | likely_benign | 0.0927 | benign | 0.607 | Stabilizing | 0.006 | N | 0.173 | neutral | N | 0.423565699 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.