Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17566 | 52921;52922;52923 | chr2:178608187;178608186;178608185 | chr2:179472914;179472913;179472912 |
N2AB | 15925 | 47998;47999;48000 | chr2:178608187;178608186;178608185 | chr2:179472914;179472913;179472912 |
N2A | 14998 | 45217;45218;45219 | chr2:178608187;178608186;178608185 | chr2:179472914;179472913;179472912 |
N2B | 8501 | 25726;25727;25728 | chr2:178608187;178608186;178608185 | chr2:179472914;179472913;179472912 |
Novex-1 | 8626 | 26101;26102;26103 | chr2:178608187;178608186;178608185 | chr2:179472914;179472913;179472912 |
Novex-2 | 8693 | 26302;26303;26304 | chr2:178608187;178608186;178608185 | chr2:179472914;179472913;179472912 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 0.004 | N | 0.381 | 0.227 | 0.262662153117 | gnomAD-4.0.0 | 1.62105E-06 | None | None | None | None | N | None | 0 | 2.36485E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.243 | likely_benign | 0.3426 | ambiguous | -0.232 | Destabilizing | 0.003 | N | 0.263 | neutral | N | 0.467982906 | None | None | N |
D/C | 0.7673 | likely_pathogenic | 0.8373 | pathogenic | 0.136 | Stabilizing | 0.984 | D | 0.449 | neutral | None | None | None | None | N |
D/E | 0.2991 | likely_benign | 0.3919 | ambiguous | -0.203 | Destabilizing | 0.189 | N | 0.491 | neutral | N | 0.474698234 | None | None | N |
D/F | 0.7016 | likely_pathogenic | 0.8048 | pathogenic | -0.331 | Destabilizing | 0.568 | D | 0.559 | neutral | None | None | None | None | N |
D/G | 0.3844 | ambiguous | 0.538 | ambiguous | -0.423 | Destabilizing | 0.104 | N | 0.47 | neutral | N | 0.491302482 | None | None | N |
D/H | 0.444 | ambiguous | 0.538 | ambiguous | -0.314 | Destabilizing | 0.664 | D | 0.457 | neutral | N | 0.461617143 | None | None | N |
D/I | 0.527 | ambiguous | 0.6732 | pathogenic | 0.218 | Stabilizing | 0.724 | D | 0.547 | neutral | None | None | None | None | N |
D/K | 0.5772 | likely_pathogenic | 0.7008 | pathogenic | 0.147 | Stabilizing | 0.428 | N | 0.628 | neutral | None | None | None | None | N |
D/L | 0.4414 | ambiguous | 0.5853 | pathogenic | 0.218 | Stabilizing | 0.272 | N | 0.565 | neutral | None | None | None | None | N |
D/M | 0.7355 | likely_pathogenic | 0.8391 | pathogenic | 0.433 | Stabilizing | 0.984 | D | 0.439 | neutral | None | None | None | None | N |
D/N | 0.1621 | likely_benign | 0.1818 | benign | 0.062 | Stabilizing | 0.361 | N | 0.463 | neutral | N | 0.496612302 | None | None | N |
D/P | 0.7494 | likely_pathogenic | 0.7938 | pathogenic | 0.09 | Stabilizing | 0.842 | D | 0.559 | neutral | None | None | None | None | N |
D/Q | 0.5282 | ambiguous | 0.6607 | pathogenic | 0.092 | Stabilizing | 0.842 | D | 0.368 | neutral | None | None | None | None | N |
D/R | 0.6263 | likely_pathogenic | 0.7436 | pathogenic | 0.248 | Stabilizing | 0.842 | D | 0.561 | neutral | None | None | None | None | N |
D/S | 0.1951 | likely_benign | 0.2578 | benign | -0.094 | Destabilizing | 0.028 | N | 0.35 | neutral | None | None | None | None | N |
D/T | 0.4194 | ambiguous | 0.5539 | ambiguous | 0.043 | Stabilizing | 0.272 | N | 0.583 | neutral | None | None | None | None | N |
D/V | 0.3437 | ambiguous | 0.4939 | ambiguous | 0.09 | Stabilizing | 0.361 | N | 0.561 | neutral | N | 0.460096206 | None | None | N |
D/W | 0.9397 | likely_pathogenic | 0.963 | pathogenic | -0.28 | Destabilizing | 0.953 | D | 0.493 | neutral | None | None | None | None | N |
D/Y | 0.3002 | likely_benign | 0.4149 | ambiguous | -0.132 | Destabilizing | 0.004 | N | 0.381 | neutral | N | 0.474935231 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.