Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17572 | 52939;52940;52941 | chr2:178608073;178608072;178608071 | chr2:179472800;179472799;179472798 |
N2AB | 15931 | 48016;48017;48018 | chr2:178608073;178608072;178608071 | chr2:179472800;179472799;179472798 |
N2A | 15004 | 45235;45236;45237 | chr2:178608073;178608072;178608071 | chr2:179472800;179472799;179472798 |
N2B | 8507 | 25744;25745;25746 | chr2:178608073;178608072;178608071 | chr2:179472800;179472799;179472798 |
Novex-1 | 8632 | 26119;26120;26121 | chr2:178608073;178608072;178608071 | chr2:179472800;179472799;179472798 |
Novex-2 | 8699 | 26320;26321;26322 | chr2:178608073;178608072;178608071 | chr2:179472800;179472799;179472798 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs867992198 | None | 1.0 | N | 0.753 | 0.397 | 0.37262878642 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/E | rs867992198 | None | 1.0 | N | 0.753 | 0.397 | 0.37262878642 | gnomAD-4.0.0 | 6.57929E-06 | None | None | None | None | N | None | 2.40964E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3653 | ambiguous | 0.3474 | ambiguous | -0.868 | Destabilizing | 0.998 | D | 0.666 | neutral | N | 0.466127048 | None | None | N |
G/C | 0.6488 | likely_pathogenic | 0.6707 | pathogenic | -1.147 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
G/D | 0.8069 | likely_pathogenic | 0.8298 | pathogenic | -1.972 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/E | 0.7864 | likely_pathogenic | 0.8187 | pathogenic | -1.978 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.45944155 | None | None | N |
G/F | 0.895 | likely_pathogenic | 0.9045 | pathogenic | -1.047 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
G/H | 0.9177 | likely_pathogenic | 0.9231 | pathogenic | -1.562 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
G/I | 0.861 | likely_pathogenic | 0.8742 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
G/K | 0.9302 | likely_pathogenic | 0.9434 | pathogenic | -1.381 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
G/L | 0.8257 | likely_pathogenic | 0.838 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/M | 0.8828 | likely_pathogenic | 0.8946 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
G/N | 0.8172 | likely_pathogenic | 0.8521 | pathogenic | -1.218 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
G/P | 0.9844 | likely_pathogenic | 0.989 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/Q | 0.8484 | likely_pathogenic | 0.8713 | pathogenic | -1.366 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/R | 0.882 | likely_pathogenic | 0.8925 | pathogenic | -1.137 | Destabilizing | 0.909 | D | 0.625 | neutral | N | 0.487967513 | None | None | N |
G/S | 0.2375 | likely_benign | 0.2267 | benign | -1.425 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
G/T | 0.6566 | likely_pathogenic | 0.6894 | pathogenic | -1.364 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
G/V | 0.7957 | likely_pathogenic | 0.809 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.499741892 | None | None | N |
G/W | 0.91 | likely_pathogenic | 0.9052 | pathogenic | -1.506 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.50050236 | None | None | N |
G/Y | 0.8702 | likely_pathogenic | 0.8808 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.