Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17576 | 52951;52952;52953 | chr2:178608061;178608060;178608059 | chr2:179472788;179472787;179472786 |
N2AB | 15935 | 48028;48029;48030 | chr2:178608061;178608060;178608059 | chr2:179472788;179472787;179472786 |
N2A | 15008 | 45247;45248;45249 | chr2:178608061;178608060;178608059 | chr2:179472788;179472787;179472786 |
N2B | 8511 | 25756;25757;25758 | chr2:178608061;178608060;178608059 | chr2:179472788;179472787;179472786 |
Novex-1 | 8636 | 26131;26132;26133 | chr2:178608061;178608060;178608059 | chr2:179472788;179472787;179472786 |
Novex-2 | 8703 | 26332;26333;26334 | chr2:178608061;178608060;178608059 | chr2:179472788;179472787;179472786 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.999 | N | 0.83 | 0.373 | 0.468336420597 | gnomAD-4.0.0 | 1.36953E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79978E-06 | 0 | 0 |
P/S | None | None | 0.992 | N | 0.77 | 0.354 | 0.340273420219 | gnomAD-4.0.0 | 4.79342E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.2993E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3748 | ambiguous | 0.3675 | ambiguous | -1.933 | Destabilizing | 0.767 | D | 0.417 | neutral | N | 0.511323543 | None | None | N |
P/C | 0.8411 | likely_pathogenic | 0.8289 | pathogenic | -1.364 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
P/D | 0.9954 | likely_pathogenic | 0.9956 | pathogenic | -2.642 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/E | 0.9856 | likely_pathogenic | 0.9857 | pathogenic | -2.492 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
P/F | 0.9762 | likely_pathogenic | 0.9709 | pathogenic | -1.172 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/G | 0.9217 | likely_pathogenic | 0.9237 | pathogenic | -2.397 | Highly Destabilizing | 0.997 | D | 0.763 | deleterious | None | None | None | None | N |
P/H | 0.9733 | likely_pathogenic | 0.9687 | pathogenic | -2.234 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
P/I | 0.7525 | likely_pathogenic | 0.7308 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
P/K | 0.9893 | likely_pathogenic | 0.9884 | pathogenic | -1.758 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
P/L | 0.5727 | likely_pathogenic | 0.5435 | ambiguous | -0.668 | Destabilizing | 0.999 | D | 0.83 | deleterious | N | 0.433659688 | None | None | N |
P/M | 0.9032 | likely_pathogenic | 0.8945 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
P/N | 0.9846 | likely_pathogenic | 0.9837 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
P/Q | 0.9641 | likely_pathogenic | 0.9621 | pathogenic | -1.823 | Destabilizing | 1.0 | D | 0.845 | deleterious | N | 0.500944704 | None | None | N |
P/R | 0.9658 | likely_pathogenic | 0.9606 | pathogenic | -1.453 | Destabilizing | 0.999 | D | 0.874 | deleterious | N | 0.512301009 | None | None | N |
P/S | 0.8617 | likely_pathogenic | 0.8532 | pathogenic | -2.384 | Highly Destabilizing | 0.992 | D | 0.77 | deleterious | N | 0.51204752 | None | None | N |
P/T | 0.767 | likely_pathogenic | 0.754 | pathogenic | -2.12 | Highly Destabilizing | 0.999 | D | 0.816 | deleterious | N | 0.500437725 | None | None | N |
P/V | 0.5467 | ambiguous | 0.5293 | ambiguous | -1.062 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
P/W | 0.9939 | likely_pathogenic | 0.9923 | pathogenic | -1.713 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/Y | 0.9862 | likely_pathogenic | 0.9824 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.