Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17578 | 52957;52958;52959 | chr2:178608055;178608054;178608053 | chr2:179472782;179472781;179472780 |
N2AB | 15937 | 48034;48035;48036 | chr2:178608055;178608054;178608053 | chr2:179472782;179472781;179472780 |
N2A | 15010 | 45253;45254;45255 | chr2:178608055;178608054;178608053 | chr2:179472782;179472781;179472780 |
N2B | 8513 | 25762;25763;25764 | chr2:178608055;178608054;178608053 | chr2:179472782;179472781;179472780 |
Novex-1 | 8638 | 26137;26138;26139 | chr2:178608055;178608054;178608053 | chr2:179472782;179472781;179472780 |
Novex-2 | 8705 | 26338;26339;26340 | chr2:178608055;178608054;178608053 | chr2:179472782;179472781;179472780 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs764884631 | -1.468 | 0.892 | N | 0.495 | 0.286 | 0.49376247819 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.68E-05 | None | 0 | None | 0 | 0 | 0 |
V/A | rs764884631 | -1.468 | 0.892 | N | 0.495 | 0.286 | 0.49376247819 | gnomAD-4.0.0 | 1.59401E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.7947E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.67 | likely_pathogenic | 0.6111 | pathogenic | -1.388 | Destabilizing | 0.892 | D | 0.495 | neutral | N | 0.50187734 | None | None | N |
V/C | 0.9028 | likely_pathogenic | 0.8658 | pathogenic | -0.994 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/D | 0.9585 | likely_pathogenic | 0.9286 | pathogenic | -1.126 | Destabilizing | 0.994 | D | 0.843 | deleterious | N | 0.52103133 | None | None | N |
V/E | 0.89 | likely_pathogenic | 0.8354 | pathogenic | -1.107 | Destabilizing | 0.996 | D | 0.818 | deleterious | None | None | None | None | N |
V/F | 0.598 | likely_pathogenic | 0.4482 | ambiguous | -0.986 | Destabilizing | 0.967 | D | 0.756 | deleterious | N | 0.47523358 | None | None | N |
V/G | 0.7954 | likely_pathogenic | 0.7267 | pathogenic | -1.726 | Destabilizing | 0.983 | D | 0.829 | deleterious | N | 0.493519326 | None | None | N |
V/H | 0.9699 | likely_pathogenic | 0.9392 | pathogenic | -1.194 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
V/I | 0.0857 | likely_benign | 0.0767 | benign | -0.559 | Destabilizing | 0.011 | N | 0.189 | neutral | N | 0.456203766 | None | None | N |
V/K | 0.9143 | likely_pathogenic | 0.8506 | pathogenic | -1.238 | Destabilizing | 0.987 | D | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.5332 | ambiguous | 0.3931 | ambiguous | -0.559 | Destabilizing | 0.369 | N | 0.353 | neutral | N | 0.500551976 | None | None | N |
V/M | 0.4785 | ambiguous | 0.3568 | ambiguous | -0.49 | Destabilizing | 0.975 | D | 0.617 | neutral | None | None | None | None | N |
V/N | 0.9133 | likely_pathogenic | 0.8479 | pathogenic | -1.054 | Destabilizing | 0.996 | D | 0.839 | deleterious | None | None | None | None | N |
V/P | 0.808 | likely_pathogenic | 0.7561 | pathogenic | -0.8 | Destabilizing | 0.996 | D | 0.82 | deleterious | None | None | None | None | N |
V/Q | 0.9088 | likely_pathogenic | 0.8431 | pathogenic | -1.171 | Destabilizing | 0.996 | D | 0.813 | deleterious | None | None | None | None | N |
V/R | 0.9052 | likely_pathogenic | 0.8321 | pathogenic | -0.745 | Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
V/S | 0.8709 | likely_pathogenic | 0.8104 | pathogenic | -1.594 | Destabilizing | 0.987 | D | 0.801 | deleterious | None | None | None | None | N |
V/T | 0.7664 | likely_pathogenic | 0.6923 | pathogenic | -1.453 | Destabilizing | 0.916 | D | 0.597 | neutral | None | None | None | None | N |
V/W | 0.9748 | likely_pathogenic | 0.9491 | pathogenic | -1.18 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
V/Y | 0.9194 | likely_pathogenic | 0.8589 | pathogenic | -0.886 | Destabilizing | 0.987 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.